Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01412 ATGGATTTACTTCATCAAGTCAAAATCACACTAAAACCATTTCAAACAACTCTATTATTAATTCTCCCACTCACTTTGGTTCTACTACTAAATTTAGCATCCAAAACACGAAAAAAAGCACCATATCCACCGGGACCAAAAGGTTTACCCTTAATAGGTAACATGAACATGATGGACAAACTCACACATAGAGGTCTAGCAAATTTAGCAAAACTATACGGCGGCGTTTTGCACCTCCGCATGGGATTCATCCACATGGTAGCAATTTCAAATGCGGAAGCTGCACGTGAAGTGTTACAATTACATGACAACATATTCTCCAATCGCCCGGCAACAATAGCCATAAGTTACCTTACTTATAATCGTGCTGACGTGGTGTTCGCTCACTATGGTCCCTTTTGGCGCCAGATGCGGAAACTTTGTGTCATGAAACTCTTTAGTCGCAAACATGTGGAGTCCTGGCAATCCGTTAGAGATGAAGTTGATGCGGTTATCACCAACATTAATGACAATGTGGGAAAGCCAGTTAACATTGGCGatttggtttttaatttaacCAAAAATATTATCTACCGTGCAGCTTTTGGGTCGAGTTCAAACGAAGGACAAGATGAGTTTATTTTGATACTTCAAGAGTTTTCGAAATTGTTTGTAGCTTTTAATATTGCGGATTATGTTCCTTTTTTAAGAGTGGTTGATCCCCAAGGTTTCAATGCTAGGCTTGTTAAGGCTAGAGGTGCTTTGGATCATTTTATTGATAAGATTATTGATGAACACGTGGAGAAAAAGAGGAATATGAGTATTGATTGTGGTGATGAAGATAGTGATATGGTTGATGAATTATTGGCTTTTAACAATGATGAAGCTAAAGTGAGTAATGAATCGGATGATCTTCAGAATTCCATCAAACTCACTAGGGACAACATCAAAGCCATCATCATGGACGTGATGTTTGGAGGAACAGAATCGGTAGCAGCAGCAATAGAATGGGCTTTATCGGAGCTAATGAGAAATCCACAAGATCTAAAGCGAGTGCAAGAAGAACTCGCAACCGTGGTTGGCTTAGACCGGCGGGTGGAGGAATCAGACATAGAGAAACTCACTTATCTAAAATGTGTCGTCAAAGAGACATTGCGTCTTCACCCGCCGGTTCCCCTTCTCCTCCATGAAACGGCGGAAGTTGCGACAATTCGTGGTTATTTTGTTCCCAAGGGCTCGCGTGTGATGATAAACGTGTGGGCTATAGGTAGAGACAAAGACTCGTGGAAAGATCCAGAAGAATTTAAGCCTTCGCGGTTTCTTAATTCAAGTGCGCCCAATTTTAAAGGAAGTAATTTTGAGTTTATTCCATTCGGGTCGGGTCGAAGATCTTGTCCCGGAATGCAATTGGGCATGTATGCATTAGACTTGGCTTTGGCCCATTTACTTCATTGCTTTACGTGGGAGTTACCTGATGGGATGAAGCCAAATGAAATGGATATGAATGATGTTTTTGGACTCAGTGCTCCTAAAGCGAGTCGACTCATTGTTGTTCCAGCTAAGCGTGTTGTGTGCCCTCTCTGA 1563 0.4127 MDLLHQVKITLKPFQTTLLLILPLTLVLLLNLASKTRKKAPYPPGPKGLPLIGNMNMMDKLTHRGLANLAKLYGGVLHLRMGFIHMVAISNAEAAREVLQLHDNIFSNRPATIAISYLTYNRADVVFAHYGPFWRQMRKLCVMKLFSRKHVESWQSVRDEVDAVITNINDNVGKPVNIGDLVFNLTKNIIYRAAFGSSSNEGQDEFILILQEFSKLFVAFNIADYVPFLRVVDPQGFNARLVKARGALDHFIDKIIDEHVEKKRNMSIDCGDEDSDMVDELLAFNNDEAKVSNESDDLQNSIKLTRDNIKAIIMDVMFGGTESVAAAIEWALSELMRNPQDLKRVQEELATVVGLDRRVEESDIEKLTYLKCVVKETLRLHPPVPLLLHETAEVATIRGYFVPKGSRVMINVWAIGRDKDSWKDPEEFKPSRFLNSSAPNFKGSNFEFIPFGSGRRSCPGMQLGMYALDLALAHLLHCFTWELPDGMKPNEMDMNDVFGLSAPKASRLIVVPAKRVVCPL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01412 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Tsu01g01412 520 Pfam Cytochrome P450 43 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 7 520 - -
Tsu01g01412 520 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PANTHER CYTOCHROME P450 84A1-RELATED 7 520 - -
Tsu01g01412 520 SUPERFAMILY Cytochrome P450 43 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 Gene3D Cytochrome P450 35 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01412 520 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01412 Tsu-Chr1 13510047 13512214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01412 50 520 Monolignol Biosynthesis Gene Families AT4G36220 72.516 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01412 K09755 - gmx:100807448 791.571