Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu01g01397 | ATGGTTGGAATGGAACTCATACCGATAGGTACAATTTTAGTTGTTCTAACCAGTCAGGTTGTGAAAACAGCGAATGCAGCAATTGATGTTCTTGTCGACAAAGAAAGTTTTAATGTCCTTTCAAAACACCTTCTTGATATTGCACCAGTCCTAAAGGAATTACAGCTTCAAGAATTGAATGAGTCACAAGCTGCAAGGGTTGCTCTGGAGTCTCTTGAATCAGATGTAAAAAAAGCAAGTAATTTGGTCGAGAAGTATAGAAACCGCGGCCGTTTTTACTTACTTATGATGTGTCGACACATAGTCAAGGAGGTTGAACAAGTCATTAGGGATATTGGAAGTTCTCTGGCTGCACTGTCACTCGCAAATACCGAAGTCCTATCTAGAATTTCTGATCAAGTCAACAGATTACAGATCGAGATGCAAAGGGCGGAGTTTGAAGCTTCACAGTCTCAGCTTGACATTGTTGATAAGTTGAACCATGGAATTAAGGAGCAAAAATTAGATCAAGCTTTTGCAAACCATATGCTTGAGGAAATAGCAAGGGCAGTTGGGGTGCCAGTGGAGCCTTTAGAGATCAACAAAGAGATAGCCAGCATTAGATGGGAAAAAGAAGAAGCTTCTAACAGGAAAGAAAGAGCAGAAGTTATTTTCTTGGAGCAGATCATTTTGCTACTTTCTCAAGCTGACGCTGCAAGGGATTATGAAGAAGTTAAGAAACAATACTTTAAAAGGGTTCAGGTAATAGAGCGATATGGATCGAGGGAAAAATATATTCCACCGCTTAATTCTTTCCTTTGTTCGATAACCGGAGAAGTTATGGTAGATCCTGTGAGTCTTTGCACTGGTACTACATGTGAGAGATCTGCTGTCGAAGTTTGGTTTGAGGATGGAAACATGGCTGACCCTAAAACAGAAGAGGTTCTTGAAGATACTACCTTAAGATCGAATGTTCGATTAAGAGAATCCATAGTAGAGTGGAGAGAACTTAATTACTGTTTTAGAATAAAGTCTATCAAGGAAAACTTATTATCGAATTCTGACTTATTGTTGAAAGAGTCCTTGAGCCAGATGCAGGCTCTCATAAGAGAGAACTCAATTAACAAGGATTGGATTTCAATAGGAGAGCTTACTGATACTATTATCTCTATCCTTGGGAACTCTGATTCCTCAGATGTCAAGATGAAGATCTTGATTACTTTGAAGGATGCTGTAGAGGGGCACGCAAGAAACAAGGAAAAAGTGGTTGAATCTCAAGGGTGGGGTTACATTATTTCCTGCTTACAGAATGGCTCTAGAATTTCAAAGGAAGCAATTGATTTGCTATATGAGTTACTTCAAGACCGTTCTGGCTGGAATAGAAGTTTCTGCAAAAGGCTTTCTGAGCATCCGAGCGCAATTCTTTACCTTGTTACCATTCTAAAGGAACCTGTCAGTGATTCAACTGGGATTGCAGAAAAGATTTTGATGGAGCTTTTTGAAATAGATGAGGACAATGTTTCTTGTGCAGCTAAGTTTGGCTGGTACAAAGATCTTATTGATCGCATTATTCAAGGATCGGAGTCTTCAAGAATCTCAATGGTTAAAGCCATGATTAATTTGGAATCGGAAGAATCAAACTTGAAATTCCTTGGTGAGCAAGGAGTTATACCTCCTTTGCTAGAAATGCTATCTGGAAGCATTGAATTGAAAGAATTGTCATTATCAGCCTTGGTCAAACTAGCAGGAGTTCATGCCAACAAGGGAATTATTGCCACATATGGTGGTGTCCCTCTTGTTCTAGAGTTAATGTTCTCTCGCAGGACACGAGCGTTCATTACAATTAAATGCTTTGAAATCCTTGAGAAGCTTTCATCTGATGATGATGGAATTGATTTCTTTATTGATGGAGAAGGGAAACAACTCGAGTTAGATAACATTATCACCGATTTGCTAGCTCTACAGCAGCTTCCTAACTCAGTTCACTATTTCCGTAAGCCTGCATTGCGCGCTCTTCTTGGCATTTGTAAGTTTGAAACAGGTTTAGTTAAGAAGGCGGTTTTGGCAGCGAATGGTGTATCGCAAATTCTTCCCCTTCTTGATGACCCTAACTCGGAAATCAGGGAAACTGCCATAtgtcttctctttcttttctcacAACATGAACCAGAAGGAGTTGTTGAATACCTCTTCAGGCCGAGAAGACTCGAAGCTTTAGTTGGGTTTCTTGAGAATGATGAAAATAAGGATGTACAAGTGGCTGCTGCTGGTTTACTTGCCAACCTTCCTAAATCCGAACGAAAACTCACTATGCAATTAATCAATTTGGGTGGCCTTGATGCAATCATCaacattttgaaaaatggtaCAATGGACGCAAAAGAAAACGCTCTCAGTGCACTCTTTAGGTTCACAGATCCAACAGATATTGAGTCACAGCGTGATTTGGTCAAACGGGGAATATATCCTTTGCTAGTAAATTTTCTCAATACTGGTTCAGTGACAGCAAAGGCGAGAGCAGCAGCATTCATCGGTGATCTTTCCATGAGCACTCCAAAGCTCACAGTTGCCTCAAAATCAACCTTTCCCTGGTGTTTTAGATCATCTCAAGCTTCTTTATGTTCGGCACATGGAAGCATTTGCAATGTGAATTCCACATTTTGTCTGTTGGAAGCAAATGCTTTGCCTGGTTTGATAAGGCTTTTACAGGAGGAAGTTCATGCAACTGCTTATGAGGCTATACAAACACTTTCCACATTGGTTTTAGAAGACTTTCCTCAGAGAGGAGCTCGTGTCTTGCACGAGTCGAATGCAATGAGACCattattgaaaattttgaactGGGGAAGTGATTCTCTCAAGGCAGAAGCTCTAGGACTCTTGGAGAAGGTGTTTGTCTCAAAGGAAATGGTTGATTACTATGGATCAACGGCTAGATTACGTCTATTTGGTCTTACCGGCATGAATGTATATGGTGATGGCCACTTAAGGAGAAAGGCTGCAAGGGTACTGTCATTGCTTGAACGCTATTCGAGGTCAAGGTCGTCGTCATCTTCAATCACCGCAGTTAGTGAAATCTACGCTTATAAGTAA | 3072 | 0.3994 | MVGMELIPIGTILVVLTSQVVKTANAAIDVLVDKESFNVLSKHLLDIAPVLKELQLQELNESQAARVALESLESDVKKASNLVEKYRNRGRFYLLMMCRHIVKEVEQVIRDIGSSLAALSLANTEVLSRISDQVNRLQIEMQRAEFEASQSQLDIVDKLNHGIKEQKLDQAFANHMLEEIARAVGVPVEPLEINKEIASIRWEKEEASNRKERAEVIFLEQIILLLSQADAARDYEEVKKQYFKRVQVIERYGSREKYIPPLNSFLCSITGEVMVDPVSLCTGTTCERSAVEVWFEDGNMADPKTEEVLEDTTLRSNVRLRESIVEWRELNYCFRIKSIKENLLSNSDLLLKESLSQMQALIRENSINKDWISIGELTDTIISILGNSDSSDVKMKILITLKDAVEGHARNKEKVVESQGWGYIISCLQNGSRISKEAIDLLYELLQDRSGWNRSFCKRLSEHPSAILYLVTILKEPVSDSTGIAEKILMELFEIDEDNVSCAAKFGWYKDLIDRIIQGSESSRISMVKAMINLESEESNLKFLGEQGVIPPLLEMLSGSIELKELSLSALVKLAGVHANKGIIATYGGVPLVLELMFSRRTRAFITIKCFEILEKLSSDDDGIDFFIDGEGKQLELDNIITDLLALQQLPNSVHYFRKPALRALLGICKFETGLVKKAVLAANGVSQILPLLDDPNSEIRETAICLLFLFSQHEPEGVVEYLFRPRRLEALVGFLENDENKDVQVAAAGLLANLPKSERKLTMQLINLGGLDAIINILKNGTMDAKENALSALFRFTDPTDIESQRDLVKRGIYPLLVNFLNTGSVTAKARAAAFIGDLSMSTPKLTVASKSTFPWCFRSSQASLCSAHGSICNVNSTFCLLEANALPGLIRLLQEEVHATAYEAIQTLSTLVLEDFPQRGARVLHESNAMRPLLKILNWGSDSLKAEALGLLEKVFVSKEMVDYYGSTARLRLFGLTGMNVYGDGHLRRKAARVLSLLERYSRSRSSSSSITAVSEIYAYK | 1023 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu01g01397 | 1023 | Coils | Coil | 69 | 89 | - | - | |
| Tsu01g01397 | 1023 | SUPERFAMILY | ARM repeat | 336 | 722 | IPR016024 | - | |
| Tsu01g01397 | 1023 | Pfam | U-box domain | 264 | 329 | IPR003613 | GO:0004842|GO:0016567 | |
| Tsu01g01397 | 1023 | Gene3D | - | 650 | 857 | IPR011989 | - | |
| Tsu01g01397 | 1023 | Gene3D | - | 858 | 1007 | IPR011989 | - | |
| Tsu01g01397 | 1023 | ProSiteProfiles | U-box domain profile. | 260 | 334 | IPR003613 | GO:0004842|GO:0016567 | |
| Tsu01g01397 | 1023 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 727 | 755 | IPR000225 | GO:0005515 | |
| Tsu01g01397 | 1023 | SUPERFAMILY | ARM repeat | 647 | 1003 | IPR016024 | - | |
| Tsu01g01397 | 1023 | SUPERFAMILY | RING/U-box | 248 | 331 | - | - | |
| Tsu01g01397 | 1023 | Coils | Coil | 127 | 154 | - | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu01g01397 | - | - | gmx:100816935 | 1602.42 |
Showing 1 to 1 of 1 entries