Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01393 ATGGGGTGTAGTGTTATTCTATCAGTGTCACCCCTTGCATTATCTCTAGCGTCAACCCGTTTCCCTCAAAAACCATTTTCTATTTCACTATCTCACCATTCTCCTTCTTTTCATTACTATTTATCATCACCTTCCACTTCAACCCGAAACACCACCACAACAAAAACAAAATTTTCAGCAATGGATAATCCAAAAAAAGATTTTCCATTAGGATTAGACGAAGAATCAGAAGAACAATATTCACTTCACTCTAATTTACTTCAACAATTCTCCACAATCTCTTCAATCGATAAGGCatggattttcaattcaaacaaaGATTCTTCTTCACAGGTGATGTTTTCTGTGAGTCAACCGAATCTTCTAGCGAACAAGAAACGGAAGTTTATTCTATCGTCTACGGTTACTAAACGGAGTGATGATGGTTCCGTTACGTTACAGTGGGCTCCGTTTCCGGTTGAAGTGTCTGGAGTTTCCGTTATGGTTCCGTCACCTTCTGGTTCGAAGCTTTTGATTGTTCGAAATGCTGAGAGTGATGGTGCTTGTAGGTTTGAAATTTGGAGTGGTTCTTGTCTTGAAAGGGAGTTTCATGTACCTCAATCCAAACATGGTTCTGTGTATACTGATGGATGgttTGAGGGAATCTCTTGGAACTCGGAAGAAACTCTTATAGCATATGTTGCTGAAGAGCCTTCCCCTGCAAAGCCTACATTCAATGATCAGGGCTACAAGAAAAGTGGTTCTGATGACAAGGATTCCAGCAGCTGGAAAGGTCAAGGAGATTGGGAGGAAGACTGGGGTGAAACATATGCGGGAAAGAGGCAGCCTGcactttttattataaacatCACTAGTGGAGAGGTTCAAGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTATGGGCTCCATCAAATGAAGGCTCTGCACAATATTTAGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCTTGTGCATTATATGTTGTTAAAGCGCCGCACGAGtcaaaaagtaaagaaaatgaGATCCACTCAGCTGAAGATGCTCAAGCGCTTAACCTAACTCAAACCATAAGTAGTGCTTTCCTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTCTTATCAGCAAGAAGTTCAGTTGATTCTGGAGCCCATTCTGCTACAAATTCACTTCATAGAATTGACTGGCCCAAGGATGTGAAGTTTGATCAATCTGCAAAAGTTCATGACGTGATACCAGTTGTGCTGTGTGCTGAGGATGATGGCTTTCCTGGGCTTTACTTTTCAAGTATCCTTAACAATCCATGGCTTTCTGATGGCCACACTTTGGTTATACCCTCTGTCTGGCACAGCAGTCAAGTTTTACTTTCTGTCGATGTGTTGAGCGGACAAATAAAACGGATCACTCCTGATGGCTCAAATTTCTCATGGAGTCTCCTTACATTGCACGGGAACAATATATTTGCTGTTTCTAGCAGTCCAGTAGATATTCCTCAAGTCAAGTATGGAACCTTTGTGGAGAAGGAAGCTGGTAATAATGAATGGAGTTGGTCAGATGTATCAAATCCCATATATAAATGCTCTGACAAGGTAAGTTCTTTGTTGTCCTCTCTTACGTTCAGTGTATTGAAGATCTCAGTCAAGGATGCTTCTGAGAACTCAACTAAAGGTTCTCGTAAACCCTATGAAGctatatttttgtcatcaaaaattaagaaaagtgACACATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCACACTCTGTCTCGTTGTCAAGCTTTTCAAAGTCACatgcttttctttcttcacttggaTATAGCTTGTTGATTGTCAACTACAGAGGTTCATTGGGATTTGGTGAGGAAGCCTTACAATCTCTTCCGGGGAATGTTGGATCTCAGGATGTCAATGATGTACTCACAGCTATTGATCATGTCATAGACTTGGGACTTGCAAGTCCATCAAAAATTGCAGTGCTTGGTGGTTCACATGGTGGCTTTTTGACAACCCACTTGATTGGCCAGGCACCAGAGAAGTTTGTTGCAGCAGCTGCAAGAAATCCTGTTTGTAACCTTGCACTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTTGAGAGCTATGGAATCAAAGGAAGAGATAGGATTACTGAAGCACCTTCAGCAGATGATCTAACTCTATTTTATAGCAAGTCTCCTATTGCCCACATTGCAAAGGTCTGTACATCAAAATAA 2292 0.3988 MGCSVILSVSPLALSLASTRFPQKPFSISLSHHSPSFHYYLSSPSTSTRNTTTTKTKFSAMDNPKKDFPLGLDEESEEQYSLHSNLLQQFSTISSIDKAWIFNSNKDSSSQVMFSVSQPNLLANKKRKFILSSTVTKRSDDGSVTLQWAPFPVEVSGVSVMVPSPSGSKLLIVRNAESDGACRFEIWSGSCLEREFHVPQSKHGSVYTDGWFEGISWNSEETLIAYVAEEPSPAKPTFNDQGYKKSGSDDKDSSSWKGQGDWEEDWGETYAGKRQPALFIINITSGEVQAVKGIDKSLSVGQVVWAPSNEGSAQYLVFVGWSFETRKLGIKYCYNRPCALYVVKAPHESKSKENEIHSAEDAQALNLTQTISSAFLPRFSPDGKFLVFLSARSSVDSGAHSATNSLHRIDWPKDVKFDQSAKVHDVIPVVLCAEDDGFPGLYFSSILNNPWLSDGHTLVIPSVWHSSQVLLSVDVLSGQIKRITPDGSNFSWSLLTLHGNNIFAVSSSPVDIPQVKYGTFVEKEAGNNEWSWSDVSNPIYKCSDKVSSLLSSLTFSVLKISVKDASENSTKGSRKPYEAIFLSSKIKKSDTCDPLIVVLHGGPHSVSLSSFSKSHAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVESYGIKGRDRITEAPSADDLTLFYSKSPIAHIAKVCTSK 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01393 763 SUPERFAMILY DPP6 N-terminal domain-like 149 513 - -
Tsu01g01393 763 ProSitePatterns Prolyl endopeptidase family serine active site. 655 685 IPR002471 GO:0004252|GO:0006508
Tsu01g01393 763 SUPERFAMILY alpha/beta-Hydrolases 590 759 IPR029058 -
Tsu01g01393 763 MobiDBLite consensus disorder prediction 244 262 - -
Tsu01g01393 763 Pfam Prolyl oligopeptidase family 610 730 IPR001375 GO:0006508|GO:0008236
Tsu01g01393 763 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 77 348 IPR045550 -
Tsu01g01393 763 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 76 760 - -
Tsu01g01393 763 Pfam WD40-like Beta Propeller Repeat 375 397 IPR011659 -
Tsu01g01393 763 MobiDBLite consensus disorder prediction 232 262 - -
Tsu01g01393 763 Gene3D - 340 396 IPR015943 GO:0005515
Tsu01g01393 763 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 76 760 - -
Tsu01g01393 763 Gene3D alpha/beta hydrolase 554 763 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01393 Tsu-Chr1 13269748 13276923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01393 594 758 Carbohydrate Esterase AT5G36210 28.485 5.17e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01393 K01303 - gmx:100803600 1086.63