Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01392 ATGGCAACCACTGAGGAAGAACACTATGCTTCTTTCTCCAACTTACTTCCACACTTCACAAATATACCCAACATTAACAAAGCATGGTTTTTCAACTCAAACACACTAGGAATGTTTTCTATTACCCAACCTGatcttttaacaaacaaaaccaAGACTTTGATTCTGTCCTGTAATATTGTTAAACAAGAAAATGATGGTTCTGTTGTTGAGTTTCTGTGGGCTCCGTTTCCAATTGAGATGTGTGGTGTTGTTTCTATGATTGTTCCTTCTCCTTCTGGTTCAAAGCTTTTTGTGATTCGGAATGAGGAGAAGGAAGGAGTGGTTTCTTGTTGTTTTGAGATTTGGAGTTGTTCTTGCTTGGAGAAGGAGTTTCATATCCCTCAATCAATGCATGGATCAGTGTACAATGATGGATGGTTTGAGGGTGTCTCATGGAACTCGGATGAAACATTGATAGCATATGTAGCAGAAGAGCCCCCTCCTACAAAGCCAGTATTTAATAATATGGGCTACAAGAAAGGTGGTTGTGCTGAGAAAGATTTTGGTAGCTGGAAAGCTCAAGGAGACTGGGAGGATGACTGGGGAGAAACATATTCTGCAAAGAGACGGCCTACACTTTTTGTTATCAACATCAATAGTGGAGAGGTACAAGCTGTCAAAGGAATCGACAAATCTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATTTACCGAAGGCTTGGAACAATATCTTGTTTTTGTCGGGTGGTCATCTGAGACAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCGTGTGCATTGTATGCTGTTAAAGCACTGTATCACGAGTCAAAATCCGATGAACCAGAGCGCCATTCAACCGAAGAATTGCATGCACTGAACCTAACTCCAACAATTAGCAGTGCGCTTTTTCCGCGATTCAGTCCAAATGGAGAGTTCCTTGTATTTTTATCTGCAAAAAGTGCTGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGAATTGATTGGCCAACTGATAGAAAACTATACCAATCTGCCAAAATTTATGACATCATTCCTATTGTAATGTGTGCCGAGGAGGGTTTTTTCCCCGGGCTCTATTGTACAACTATCCATAATAATCCTTGGCTTACCGATAACTGCACAATGATCATATCATCCATCTGGCACAGCTGTGAAGTTCTACTCTCTGTGAATGTGTTGAGTGGGGAAGTATTACGTATCACCCCAGCAGACTCGACTTTCTCGTGGAATCTTCTTACACTTGATGGGAACAATGTTCTTGCCATTTCCAGTAATCCAGTCAATGTTCCTCAAATTATGTATGGAATTGTCATTGAGAAGGAGAAGAGAAATACTACATGGAGTTGGTCTAAGATATCGAGTCCCGTATTCAAATGCTCCGACAAGGTTAATTCTTTGATGTCCTCTCTCCAGTGCAGTATACTGAAGATCTTCGTCACAGatgcttttaatgatccaacaAAAGGTGCTGCTAAACCTTTTGAAGCTATATCTGTGTCATCGAAAACCAGGAACAAGGATGTATTTGATCCATTAATTGTAATCCTTCACGGAGGGCCACAAGACGTGTCTTTGTCGCACTTCTCAAAGTCTTGGGCGTTTCTATCTTCAGTCGGATACAGCTTGCTCATTGTAAATTACAGAGGTTCATTAGGATTTGGTGAAGAAGCATTACAATCTCTTCCAGGGAAAGTTGGATCTCAgGATGTCAACGATGTCCTCTCTGCGATAGATCATGCGATCAACTTAGGTCTTGCTAGTCCGTCCAAGATTACGGTGATGGGAATTTCACATGGCGGTTTTTTGTCGACTCATTTGATTGGTCAGGCACCCGAGAAGTTTGTAGCAGCGGCCGCAATCAATCCTGTTTGTAACTTTGCACTGATGGTCGGTACAACTGATATTCCTGATTGGTGCTATGTAGAGGCCTTTGGAACCAATGCCGGAAATCGCTATATCGAAGCACCGTCAGAAGAAGATTTGACTCTCTTCTATAGCAAGTCACCTATTTCGCATGTTTCAAAGGTAAAAACACCAACACTTTTCCTTTTAGGTGCTCAAGATCTTCGTGTTCCAATCTTCGATGGACTGCAATATGCTCGAGCTTTAAGAGAGAAAGGAGTAGATACCAAAATCATCATGTTTCAAAATGATGTTCATGCACTCAAAAGGTCCCAATCTGAATGGGAATGTTTGCTTAACACTGTGATGTGGTTCAACAAATATTGCAAATAA 2274 0.4085 MATTEEEHYASFSNLLPHFTNIPNINKAWFFNSNTLGMFSITQPDLLTNKTKTLILSCNIVKQENDGSVVEFLWAPFPIEMCGVVSMIVPSPSGSKLFVIRNEEKEGVVSCCFEIWSCSCLEKEFHIPQSMHGSVYNDGWFEGVSWNSDETLIAYVAEEPPPTKPVFNNMGYKKGGCAEKDFGSWKAQGDWEDDWGETYSAKRRPTLFVININSGEVQAVKGIDKSLSVGQVVWAPFTEGLEQYLVFVGWSSETRKLGMKYCSNRPCALYAVKALYHESKSDEPERHSTEELHALNLTPTISSALFPRFSPNGEFLVFLSAKSAVDSGVHNATNSLHRIDWPTDRKLYQSAKIYDIIPIVMCAEEGFFPGLYCTTIHNNPWLTDNCTMIISSIWHSCEVLLSVNVLSGEVLRITPADSTFSWNLLTLDGNNVLAISSNPVNVPQIMYGIVIEKEKRNTTWSWSKISSPVFKCSDKVNSLMSSLQCSILKIFVTDAFNDPTKGAAKPFEAISVSSKTRNKDVFDPLIVILHGGPQDVSLSHFSKSWAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHAINLGLASPSKITVMGISHGGFLSTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVEAFGTNAGNRYIEAPSEEDLTLFYSKSPISHVSKVKTPTLFLLGAQDLRVPIFDGLQYARALREKGVDTKIIMFQNDVHALKRSQSEWECLLNTVMWFNKYCK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01392 757 Gene3D alpha/beta hydrolase 510 755 IPR029058 -
Tsu01g01392 757 Pfam Prolyl oligopeptidase family 540 756 IPR001375 GO:0006508|GO:0008236
Tsu01g01392 757 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 2 757 - -
Tsu01g01392 757 SUPERFAMILY DPP6 N-terminal domain-like 83 446 - -
Tsu01g01392 757 SUPERFAMILY alpha/beta-Hydrolases 524 756 IPR029058 -
Tsu01g01392 757 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 278 IPR045550 -
Tsu01g01392 757 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 2 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01392 Tsu-Chr1 13258375 13265213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01392 524 754 Carbohydrate Esterase AT5G36210 24.464 1.94e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01392 K01303 - gmx:100812681 1209.13