Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01388 ATGACAGAAAGTACAAAGACAATAGTGAGGAAGACAAGCATATCACCCAGGAGTACTTGGATTAAGTTTGATGCAAATGGACATAGTTCTTTCCTTGATGTAGACAAGTATGAAATCATGCGTCAAGTTCGTATTGACGCACGTGATTTTAGAATTCTTGATCCTCTTCTCTCTTATCCTTCCACCATTCTAGGCCGAGAAGAGGTTATAGTTCTTAACCTCGAGCATATCAAGGCAATCATCACTGCTGAAGAGGTCTTTTTGCTAGACCCAACTAGTGAAGATGTAGTGCCTGTTGTTAGGGAACTACTAAGGAAATTGTCTACCATTGACACAAATCAGGGAGATGATGATCAAGTCAATAGTCCACTTGAGATTGAAgtagatgaagatgatgAGACACCTTTCGAATTTCGAGCACTAGAGATATTTCTTGAAGCAATTTGTAACTTCCTTGATGCACGAGCTGCAGATCTTGAGATGGATACTTATCCTACATTAGATGAACTTACCAACAAGATCAGTAGTcgaaatttggaaaaaattcgTAAATTGAAGAGTGCAATGACAAGGTTAACCGCCAGAGTTCAAAAGGTAAAAGAATCGATTGAACACTtaatggatgatgatgaagacaTGGCTGATCTATACTTATCAAGAAAATTGGAAGGAGGAGCATCATCACCTATAAGTCAATCAGGTGCTGCAAATAATTGGATTATTTCATCCCCAAGCACCAAATCAAAAAGTGTAGCAACATTACTAAGAgatgaaaatgatgtggagGAACTTGAAATGTTACTTGAGGCTTATTTCATGCAAATTGATGCCACTTTTAGTAGATTATCTACCcTGCGAGGTTATATCGATGATACAGAGGATTACATTAATATTCAGATTGACAACCATCGAAATCAGTTGATTCAGTTAGAGCTATTTCTTAATGCAGCAGAACTTTGTCTAGCATGTTATTCAGTGGTGACTGGAATACTTGGTATGAATCTTCACTATGATTGGCAAACTGACCATGATTACATGTTCAAATGGGTGGTTATTTTTACAGGATTCTGTTGTTTTTCTCTATATCTCATCATAATTGCCCATGCTCGCAAAAAGGGATTGGTTGGATCATGA 1134 0.3519 MTESTKTIVRKTSISPRSTWIKFDANGHSSFLDVDKYEIMRQVRIDARDFRILDPLLSYPSTILGREEVIVLNLEHIKAIITAEEVFLLDPTSEDVVPVVRELLRKLSTIDTNQGDDDQVNSPLEIEVDEDDETPFEFRALEIFLEAICNFLDARAADLEMDTYPTLDELTNKISSRNLEKIRKLKSAMTRLTARVQKVKESIEHLMDDDEDMADLYLSRKLEGGASSPISQSGAANNWIISSPSTKSKSVATLLRDENDVEELEMLLEAYFMQIDATFSRLSTLRGYIDDTEDYINIQIDNHRNQLIQLELFLNAAELCLACYSVVTGILGMNLHYDWQTDHDYMFKWVVIFTGFCCFSLYLIIIAHARKKGLVGS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01388 377 Gene3D - 6 91 - -
Tsu01g01388 377 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 377 IPR039204 -
Tsu01g01388 377 Gene3D Magnesium transport protein CorA, transmembrane region 96 307 - -
Tsu01g01388 377 Coils Coil 182 209 - -
Tsu01g01388 377 CDD Mrs2_Mfm1p-like 20 374 IPR039204 -
Tsu01g01388 377 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 7 377 - -
Tsu01g01388 377 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 314 365 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01388 Tsu-Chr1 13201046 13208812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01388 7 350 MRS2 Gene Family AT5G64560 61.517 2.73e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01388 K16075 - egr:104456136 463.381