Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01386 atggaTCCCTTTTATCCTGAAAATCTTTTAGGTGAAGTTTTCTTTGATGAACCTCTAACTTCAAATCAAAGTGATTTTGCTATGGCACAACAACCTCCTACACAAAATTTAAGTGCTTTTGTTCAATATAGAGACCAACCCAAGATTAgttttgttgaagaaaattCAAATACCATTAACAAGAGAATGGTtgcatttttgaaaaaaagtttgcctttagagaaaaataaagtaGCTGAATGTGAAAGAGAACGTGGTTTCAAACACATGATTAGTGAAAGAATGAGAAGACAAAGACAAAGACAGTGTTGCTCTAACTTACATTCAGTGTTACCTCAAGGAACAAAAACAGATAATAACTCGGTAGTTCAAACCGCGGCCAAGGAAATTCAAAGGCTACAAGGATACAAAGATGAATTGGAGAGGAAAAAATTTATGCTTGAAGAAAATGTTGAAGTAATTGAGGGAAGAAAACATTATTTGAGAGTGCCAAACCATGCTACATCTGGAATTATTAGTTCTATGATTGAGACACTCAAAATGTTGAAAGACCATGGTGTGGAAACTACAAGCATCAAGTCTAATTTTTCTCAACAGGAGTTGTTTGCAATCTTAGAGATTGAAACTGAGGTATGTTTATGTCTAAAACCAACATTCTATATTGTTCTTGTGCTAAGGTTGTGGTTGCAAATCTTGATATTACATATTAATCTGGAGAAGAATTTGTGTCAGATACGTGTTAGATATTGA 750 0.3147 MDPFYPENLLGEVFFDEPLTSNQSDFAMAQQPPTQNLSAFVQYRDQPKISFVEENSNTINKRMVAFLKKSLPLEKNKVAECERERGFKHMISERMRRQRQRQCCSNLHSVLPQGTKTDNNSVVQTAAKEIQRLQGYKDELERKKFMLEENVEVIEGRKHYLRVPNHATSGIISSMIETLKMLKDHGVETTSIKSNFSQQELFAILEIETEVCLCLKPTFYIVLVLRLWLQILILHINLEKNLCQIRVRY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01386 249 PANTHER TRANSCRIPTION FACTOR BHLH92 21 213 - -
Tsu01g01386 249 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 21 213 IPR044658 -
Tsu01g01386 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 155 IPR036638 GO:0046983
Tsu01g01386 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 133 IPR011598 GO:0046983
Tsu01g01386 249 Pfam Helix-loop-helix DNA-binding domain 89 134 IPR011598 GO:0046983
Tsu01g01386 249 SMART finulus 90 139 IPR011598 GO:0046983
Tsu01g01386 249 Gene3D - 84 162 IPR036638 GO:0046983
Tsu01g01386 249 Coils Coil 123 157 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01386 38 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 39.459 1.65e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tsu01g01386 HLH 2.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01386 - - gmx:100815874 223.402