Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01381 ATGGCTCAATCTTTGTCATTCACAGTAAAGAGGCGTGACCCTGAATTTGTAAAGCCATCAAAACCAACTCCTCATACAATAAAACTACTATCAGATGTAGATGATCAAGAAGGGTTACGTTTTCAAATTCCTATTATATCATTTTACAAATATGATCCAAATATGGCAGGGAAAGATCCTGTTGATATTATTAGAAAAGCACTTGCAAAAACACTTGTGTTTTTCTATCCACTTGCTGGTAGATTGAGGGAAGTTCCTAGTAGGAAAGTTATAGTTGATTGTAATGATGaaggtgttttgtttattgAAGCTGATGCTGATGTTACTCTTGAACAATTTGGTGATGCTCTACAACCTCCTTTTCCTTGTTTGAATGAGCTTCTTTATGATGTTCCTGGTTCTTCAGATGTGATTAACACTCCAATTCTGCTTATTCAGGTAACACGCCTTAAATGTGGTGGTTTCATTTTTGCTATTCGTCTAAACCATCTAATTAGCGATGCAACTGGTTTGGTCCAATTCATGACTGCCGTAGGTGAAATTTCTCGTGGGATGAACATACCTTCAGTCGTACCAGTATGGCGCCGAGAGCTTCTAAACGCAAGAGATCCACCAAGAGTGACATGTAGTCATCGTGAATACGAACAAGTTCCTGATACCAAAGGAACCAATGTCCCCTTAGATGACATGGCCCACCACTCTTTTTTCTTCGGGCCCACAGAGTTAGCCGCACTCCGCCCTCTATTTCCATCTCACCTACAACAACAATCCAGATTTGAAATTATAACTGCATGTCTCTGGCGTTGTCGTACAATTGCGTTACAACCTGCCAATGACGAGGAAGTTCGCATaatttgcatatataatgcacgTGGCAAGTTTAATCCACCATTACCAAAAGGTTACTATGGTAATGCTTTCGCATTTCCAGTTGCAATTTCAACTGCAGGAAAACTAATTGAAAATCCATTAGGATATGCATTGGAATTAATTAAGAAAGCAAAAGCGGACGTCACTGAAGAATATATGCATTCGATGGCAGATTTAATGGTTATTAAGGGTCGTCCTCATTTTACTTCAGTGAGAATGTATTTAGTGTCTGATGTTACACATGTTGGACTTAGAGATGTTGATTTTGGTTGGGGAAAAGCTGTTTATGGAGGACCAGCTCATGGAGGAGTTGGTGTTGTACCTGGTCTTGCTAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGTTTAGTTATACCAGTTTGTTTGCCAACTCAAGCCATGAAGAGGTTCGTTAAAGAGCTGGATATTCTGCTTAAAAACAACATTAGCCAACCCAATAAAGGTGGTCTAAAATCCAGTTTCATTATTTCTTCATTGTAG 1380 0.3812 MAQSLSFTVKRRDPEFVKPSKPTPHTIKLLSDVDDQEGLRFQIPIISFYKYDPNMAGKDPVDIIRKALAKTLVFFYPLAGRLREVPSRKVIVDCNDEGVLFIEADADVTLEQFGDALQPPFPCLNELLYDVPGSSDVINTPILLIQVTRLKCGGFIFAIRLNHLISDATGLVQFMTAVGEISRGMNIPSVVPVWRRELLNARDPPRVTCSHREYEQVPDTKGTNVPLDDMAHHSFFFGPTELAALRPLFPSHLQQQSRFEIITACLWRCRTIALQPANDEEVRIICIYNARGKFNPPLPKGYYGNAFAFPVAISTAGKLIENPLGYALELIKKAKADVTEEYMHSMADLMVIKGRPHFTSVRMYLVSDVTHVGLRDVDFGWGKAVYGGPAHGGVGVVPGLASFYIPFKNAKGEEGLVIPVCLPTQAMKRFVKELDILLKNNISQPNKGGLKSSFIISSL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01381 459 Gene3D - 4 212 IPR023213 -
Tsu01g01381 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
Tsu01g01381 459 Pfam Transferase family 9 434 - -
Tsu01g01381 459 Gene3D - 213 434 IPR023213 -
Tsu01g01381 459 PANTHER - 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01381 Tsu-Chr1 13146964 13148901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01381 12 434 Monolignol Biosynthesis Gene Families AT5G48930 30.543 1.11e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01381 K19861 - gmx:100797017 715.301