Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01380 ATGGTCCAATCTCTGGCATTCACAGTAAAGAGGCATGCCCCTGAATTTGTAAAGCCATCAAAACCAACTCCTCATACAATAAAACTACTCTCAGATGTAGATGATCAAGATGGATTACGTTTTCAAGTTCCTGTTATTCAATTTTACAAATATGATCCAAATATGGCAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCACTTGCAAAAACACTTGTGTTTTATTATCCACTTGCTGGTAGATTGAGGGAAGTTCCTAGTAGGAAAGTTATAGTTGATTGTAATGATGaaggtgttttgtttattgAAGCTGATGCTGATATTACTCTTGAACAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGGATGAACTTCTTTATGATGTTCCTGGTTCTTCAGATGTTATTAACACTCCAATTCTGCTTATTCAGGTAACACGCCTCAAGTGCAGAGGTTTCATTTTTGCTATTCGTTTCAATCATACAATGAGCGATGCATCAGGTATAATACAGTTCATGAGTGCTTTAGGGGGAATATCTCGCGGGATGAACGAACCTTCAATCTCACCAGTGTGGTGCAGAGAGCTTCTAAGCGCAAGAGACCCACCAAGAGTGACATGTACTCATCGTGAATACGAACCGATACCTGACAACAAAGGAACCATATTTCCTTTAGAAGACATTATGGTCCATCACATTTTCTTCTTTGGTCCAACCGAGGTAGCCACAATTCGCTCTCTCCTTCCACCTGATCAACAACTACaacaatattccaattttgaaatcatTGCAGCTTACTTTTGGCGTTGTCGTACAATAGCATTACAACTAGATGCAAATGAAGAAGTTCGCATAATCAGTGTAGTCGATGCACGTAGCAAATCTGTTAACTTACTACTACCAAAAGGTTATTATGGTAACGCTTTAGCGTTTCCCGTTGCAATTACAACTGCACGAAAACTAATTGAAAATCCGTTGGCATATGCGTTGAGTTTAGTTAAGAAAGCAAAAGCTAATGTCACCAAAGAGTATATGCATTCAGTGGCAGATTTAATGGTTATCAAGGGTCGACCTCCATTTACTACGGCTGGACTATTTTTCGTGTCTGATGTTACGCGTGCTGGATTTAGAGAGGTTGATTTCGGTTGGGGGAAAGCTATTTATGGAGGGCCGGCTAAAGGAGGTGATGGTGCTCTTCCTGGTCAAGCTGTCTTTCATTTACCATTTACAAATGCTAAAGGAGAGAAAGGTTTAGTCATACCGGTTTTTTTGCCAAATCAAGTCATAGAAAGGTTGGTTAAAGAGTTAGATAGTTTACTTAAGAGCAACAATAACAAACCTAGTAAGGGTGATCCAATATCTGGTATCATTAATTCTTCCTTGTAG 1392 0.3843 MVQSLAFTVKRHAPEFVKPSKPTPHTIKLLSDVDDQDGLRFQVPVIQFYKYDPNMAGKDPVDVIRKALAKTLVFYYPLAGRLREVPSRKVIVDCNDEGVLFIEADADITLEQFGDALQPPFPCLDELLYDVPGSSDVINTPILLIQVTRLKCRGFIFAIRFNHTMSDASGIIQFMSALGGISRGMNEPSISPVWCRELLSARDPPRVTCTHREYEPIPDNKGTIFPLEDIMVHHIFFFGPTEVATIRSLLPPDQQLQQYSNFEIIAAYFWRCRTIALQLDANEEVRIISVVDARSKSVNLLLPKGYYGNALAFPVAITTARKLIENPLAYALSLVKKAKANVTKEYMHSVADLMVIKGRPPFTTAGLFFVSDVTRAGFREVDFGWGKAIYGGPAKGGDGALPGQAVFHLPFTNAKGEKGLVIPVFLPNQVIERLVKELDSLLKSNNNKPSKGDPISGIINSSL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01380 463 Gene3D - 4 216 IPR023213 -
Tsu01g01380 463 PANTHER ALCOHOL ACYLTRANSFERASE 7 444 - -
Tsu01g01380 463 Gene3D - 226 437 IPR023213 -
Tsu01g01380 463 Pfam Transferase family 12 437 - -
Tsu01g01380 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01380 Tsu-Chr1 13109656 13128646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01380 17 422 Monolignol Biosynthesis Gene Families AT5G48930 30.166 5.80e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01380 K19861 - gmx:100797017 647.506