Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01377 ATGGCCCAATCTCTGTTATTCACAGTGAAGAGGCATGCCCCTGAATTTGTAAAGCCATCAAAACCAACACCTCATGAAATAAAACTACTCTCAGATATTGATGATCAAGATGGATTACGTTTTCAAATTCCAGTGATACAATTTTACAAATATGATCCAAATATGAAAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCACTTTCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTAAGGGAAGGTCCTGGTAGGAAACTTATGGTGGATTGTAATGATGAAGGTGTTTTGTTCATAGAAGCTGATGCTGAtgttagccttaaagaatttgGTGATGCTCTTCATCCTCCTTTTCCTTGTTTGAATGAACTTCTTTTTGATGTTCCTGGTTCTTCAGAAGTGCTTAACACTCCATTGCTGCTTATTCAGGTAACACGCCTTAAATGCGAGGGTTTCATTTTTGCTCTTCGTCTAAATCACACAATGAGTGATGCACCAGGTATAGTACAATTCATGAATGCCTTAGGTGAAATATCTCGCGGAAATAGTGAACCTTCAATTTCACCAGTGTGGTGTAGAGAAATTCTTAATGCAAGGGACCCACCGAGAGTGACATGTACTCATCGCGAATATGAACAAGTACCAGATGACAATGGTACCATCTTTCCCTTAACTGATGGGGTCAACCGCACTTTCTTCTTTGGTCCGACCGAGGTAGCCACAATTCGTTCTCTCCTTCCAACTAACCAACAAGAACAATACTCCAATTTTGAAATCATCACCGCGTACTTTTGGCGTTGTCGTACAATTGCATTACAATTAGATTATGACAAAGAAATACGCATAATCTGCGTAGTCAATGCACGTAGCAAATTTGTTAACCTGCCGTTACCAAAAGGTTACTATGGTAACGCTTTAGCGTATGCTACTGCAGTTACAACTCCAAGAAAACTTATTGAAAATTCATTGGATTATGCATTGAATTTAGTTAAGAAAGCAAAATCTAATGTCACCAAAGAGTATATGCATTCAGTTGCGGATTTACTGGTTATCAAGGGTCGACCTCACTTTACTTTGGTGAGATCGCATATCGTTGTTGATGTGACACGAAATAGATCTGGAGAGGTTAATTTCGGTTGGGGGAAAGCTGTTTATGGAGGACAACCTAGAGGAGGAGGAGATGGTGATATTCCTGGTCTTGTTAGCTTTCATATACCTTTTAAAAATGCTAAAGGGGAGGAAGGTGTGGTTATACCATCTTTCTTTTCACCTCAAATCATGGAGCGGTTGGTCAAAGAGATGGAGAGTGTGCTTAAGAGCAACACTAATCAACTTACTAAGGCTGATCCAAGATCTAGTATCATTATTTCTTCGTTATAG 1389 0.3859 MAQSLLFTVKRHAPEFVKPSKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPNMKGKDPVDVIRKALSKTLVFYYPFAGRLREGPGRKLMVDCNDEGVLFIEADADVSLKEFGDALHPPFPCLNELLFDVPGSSEVLNTPLLLIQVTRLKCEGFIFALRLNHTMSDAPGIVQFMNALGEISRGNSEPSISPVWCREILNARDPPRVTCTHREYEQVPDDNGTIFPLTDGVNRTFFFGPTEVATIRSLLPTNQQEQYSNFEIITAYFWRCRTIALQLDYDKEIRIICVVNARSKFVNLPLPKGYYGNALAYATAVTTPRKLIENSLDYALNLVKKAKSNVTKEYMHSVADLLVIKGRPHFTLVRSHIVVDVTRNRSGEVNFGWGKAVYGGQPRGGGDGDIPGLVSFHIPFKNAKGEEGVVIPSFFSPQIMERLVKEMESVLKSNTNQLTKADPRSSIIISSL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01377 462 Pfam Transferase family 12 438 - -
Tsu01g01377 462 Gene3D - 8 216 IPR023213 -
Tsu01g01377 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 443 - -
Tsu01g01377 462 Gene3D - 219 437 IPR023213 -
Tsu01g01377 462 PANTHER ALCOHOL ACYLTRANSFERASE 7 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01377 Tsu-Chr1 13066105 13068428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01377 40 421 Monolignol Biosynthesis Gene Families AT5G48930 27.960 8.08e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01377 K19861 - gmx:100797017 642.499