Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01358 ATGGAAGTAAATGAGAAGTGTGATGTGTATAGTTTCGGAGTGTTAACCATGGAAATACTTTTTGGAAAGCATCCCGGAGATATTGTATCTACTTTGTTGCAATCGAGTGGCATATACCAAACAATTGAAGCTATGTCATTGAATGATAAGTTGGATCAACGCCTTCCTCGTCCTAGGAATGCTATCCGGAAAGAAGTTGAATCAATTATCAGAATTGCATGTCGTTGCTTAATTGAAAGCCCACATAGTCGCCCATCAATGGAGCAAGTTTGCAAGGAGATTGCAATGTTAAAAACATCTTCAAATATAGCAATGGGTTGA 321 0.3832 MEVNEKCDVYSFGVLTMEILFGKHPGDIVSTLLQSSGIYQTIEAMSLNDKLDQRLPRPRNAIRKEVESIIRIACRCLIESPHSRPSMEQVCKEIAMLKTSSNIAMG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01358 106 Pfam Protein tyrosine and serine/threonine kinase 3 93 IPR001245 GO:0004672|GO:0006468
Tsu01g01358 106 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01358 106 SUPERFAMILY Protein kinase-like (PK-like) 3 97 IPR011009 -
Tsu01g01358 106 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 100 - -
Tsu01g01358 106 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Tsu01g01358 106 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01358 Tsu-Chr1 12879268 12879588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01358 2 106 Trihelix Transcription Factor Family AT5G38560 30.357 1.66e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu01g01358 PK_Tyr_Ser-Thr 1.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01358 - - mtr:MTR_0365s0020 148.288