Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01357 ATGCTTGAGAGGATGAAGCTTTTACCAAAGCTGTGTCTTGTTGTGTTTTATTGCATGTTTGTAATGGCTACATCATCTCATTCTACAGAAAAAATCCAAGGCAGTGATGAGGCAAATGCTCTATTGAAATGGAAAGCAAGCTTTGATAATCAAAGCAAGGCTTTACTCTCTTCATGGAATATTGGTAATAATCATTGCAATTGGATGGGAATCACATGTGATGTTGAGTCAAAATCCATCTACAAGGTAAATCTTGTCAATATTGGATTAAAAGGTACACTTCAAAGTCTCAATTTTTCATCACTTCCAAATATTCGCAGTCTAGTTTTATCAAACAACTCCTTTTATGGTGTTGTTCCACACCATATTGATGTAATGTCCAatctaaatactcttgatttgTCACTAAATTATTTCTCTGGTAGTATTCCCAATAGCATTGGTAATTTGTCAAAACTCTCCTATATTAATCTTAGTGAAAGTGATATCTCTGGAATTATTCCATTTGAGATAGGTAGGCTGAGGAATCTGACAATACTTGATATTAATAGTTGTTATCTCACAGGGACTATACCAATATCAATAGGAATGTTGGCCAAATTATCAAGTCTAAAGTTATATAATAACAGTCTTCTCGGCCACATTCCTCGTGAAATTGGTAAGGACAATCCCTTCTACAATTGGAAACTTGAGCAATTTATATTGGATTATCTTCATACCAATCATCTCACGGGTAACATTCCCACTGAAATCGGAAAGCTATATTCCCTTTCCTCGTTCCAATTGTTAACAAACAACCTCTCTGGACCAATTCCTTCATCCATAGGTAACTTGGTCAATTTGGATAATATTCTCCTTCAAACAAATAAACTCTCTGGACCAATTCCTTCTACTATTGGAAATTTGACAAAACTCACTCGCTTATTGATTTTCTCCAATGCACTAAGTGGCGATATTCCAATAGAAATGAATAGGCTTaccaattttaatattttggagTTAGGTGATAATGATTTCATAGGTCAATTACCTCACAACATTTGTGTTGGTGGAAACTTAACATTGTTCACTGCTAGAAATAATCATTTCACAGGCCTAATTCCAAAGAGTTTGAAAAATTGCTCGAGTCTTATAAGAGTTAGGCTTGAACACAATCATCTAACTGACAATATAACTACTAGTTTTGGTGTGTATCCACATTTGAACTACATGGACTTGAGTGAGAACAATTTGTATGGACATCTATCACCAAATTGGGGAAAGTGCAACAATCTAACGAGCCTTCAAATCTCCAACAATAATTTATCAGGAAGCATACCACCAGAACTAGGTCGAGCAACAAATTTACATATACTTAAATTATCTTCAAACCATCTTATAGAAAAAATTCCAAAAGAACTAGAAAACTTATCTTTGTTGATCCAACTCTCGGTAAGTAATAATCATCTTTCAGGAGAAGTTCCTATACAAATTGCATCATTGCAGGAACTAAATACCTTGGAGCTTTCAACAAATAATTTAAGTGGTTCCATCCAAAAACAACTTGGAAGGTTGCCAAAGTTATTGCACTTGAATTTAAGCAAAAATAAGTTTGAAGGAAACATTCCTGTTGAGTTTTGCCAATTAGAAGTTGTTGAAGATCTTGATCTTAGTGGGAATTATCTAAATGGAACCATACCAGCAATGCTTGGACAATTAAATCACTTACAATCATTGAATCTGTCACACAATAATCTATCTGGTACCATTCCCTTGAGCTATGGTGAGATGATAAGCTTGACAACTGTTGATATATCATACAATTGGTTGGAGGGTCCGATTCCAAACATTCCAGCCTTTCAAAAAGCACATATTGAAGAACTGAGAAACAACAAAGACTTGTGTGGTGGTAATGCCTCTAGCCTAAAGCTTTGTCCAACATATAGTGGTAACTCTCATACTCCAAAGACAAAAAAGAATTTGGCACTAGTTTTACCTCTCACTCTAAGCACTGTACTGATAGCACTATTTGTTTGTGGGTTCGCATATCATCATCGATGGCGAACTTCAAGCACAAAAGAAAACAAGGTTCCTGAAGAATCAAACACTGAAAATCTTTTTGCAATATGGAGTTTTGATGGAAAAATGGTGTATGAGAACATTATTGAAGCCACAGAAGCGTTTGACAACAAGCATCTCATTGGGGTTGGAGGACATGGATGTGTTTACAAAGCAGAGTTGCCTACAGGACAAGTTGTAGCTGTGAAGAAACTCCATTCATTACAAAATGGAGAAATGTCGAATTTGAAAGTTTTTGCAAGTGAGATTCAAGCTTTAACAGAAATTCGACATCGAAACATTGTGAAGTTATATGGATATTGCTCACATCCATTGCACTCATTTTTGGTTTATGAGTTCTTGGAGAAGGGTAGTGTGGACAAAATTTTGAAAGATGATGAACTAGCAACTGCATTTGATTGGAATATGAGAGTGAATGCCATTAAAGATACAGCTAATGCTTTATCTTATATGCATCATGATTGTTCTCCTGCAATTGTTCATCGTGATATATCCAGCAAGAATGTTATTTTGGATCTGGAATATGTGGCTCATGTATCAGACTTCGGTACAGCTAAGTTTCTTAATCCCGATTCTTCCAACTGGACCTCTTTTGTGGGCACATTGGGATATGCTGCACCAGGTTAA 2685 0.3527 MLERMKLLPKLCLVVFYCMFVMATSSHSTEKIQGSDEANALLKWKASFDNQSKALLSSWNIGNNHCNWMGITCDVESKSIYKVNLVNIGLKGTLQSLNFSSLPNIRSLVLSNNSFYGVVPHHIDVMSNLNTLDLSLNYFSGSIPNSIGNLSKLSYINLSESDISGIIPFEIGRLRNLTILDINSCYLTGTIPISIGMLAKLSSLKLYNNSLLGHIPREIGKDNPFYNWKLEQFILDYLHTNHLTGNIPTEIGKLYSLSSFQLLTNNLSGPIPSSIGNLVNLDNILLQTNKLSGPIPSTIGNLTKLTRLLIFSNALSGDIPIEMNRLTNFNILELGDNDFIGQLPHNICVGGNLTLFTARNNHFTGLIPKSLKNCSSLIRVRLEHNHLTDNITTSFGVYPHLNYMDLSENNLYGHLSPNWGKCNNLTSLQISNNNLSGSIPPELGRATNLHILKLSSNHLIEKIPKELENLSLLIQLSVSNNHLSGEVPIQIASLQELNTLELSTNNLSGSIQKQLGRLPKLLHLNLSKNKFEGNIPVEFCQLEVVEDLDLSGNYLNGTIPAMLGQLNHLQSLNLSHNNLSGTIPLSYGEMISLTTVDISYNWLEGPIPNIPAFQKAHIEELRNNKDLCGGNASSLKLCPTYSGNSHTPKTKKNLALVLPLTLSTVLIALFVCGFAYHHRWRTSSTKENKVPEESNTENLFAIWSFDGKMVYENIIEATEAFDNKHLIGVGGHGCVYKAELPTGQVVAVKKLHSLQNGEMSNLKVFASEIQALTEIRHRNIVKLYGYCSHPLHSFLVYEFLEKGSVDKILKDDELATAFDWNMRVNAIKDTANALSYMHHDCSPAIVHRDISSKNVILDLEYVAHVSDFGTAKFLNPDSSNWTSFVGTLGYAAPG 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01357 894 SUPERFAMILY Protein kinase-like (PK-like) 700 893 IPR011009 -
Tsu01g01357 894 Gene3D Ribonuclease Inhibitor 149 232 IPR032675 -
Tsu01g01357 894 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 179 893 - -
Tsu01g01357 894 Gene3D Ribonuclease Inhibitor 36 148 IPR032675 -
Tsu01g01357 894 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 178 - -
Tsu01g01357 894 SUPERFAMILY L domain-like 36 221 - -
Tsu01g01357 894 SUPERFAMILY RNI-like 238 610 - -
Tsu01g01357 894 Gene3D Ribonuclease Inhibitor 354 639 IPR032675 -
Tsu01g01357 894 ProSitePatterns Protein kinases ATP-binding region signature. 727 750 IPR017441 GO:0005524
Tsu01g01357 894 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Tsu01g01357 894 Pfam Leucine rich repeat 496 555 IPR001611 GO:0005515
Tsu01g01357 894 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Tsu01g01357 894 Gene3D Ribonuclease Inhibitor 238 353 IPR032675 -
Tsu01g01357 894 Gene3D Phosphorylase Kinase; domain 1 681 799 - -
Tsu01g01357 894 ProSitePatterns Tyrosine protein kinases specific active-site signature. 845 857 IPR008266 GO:0004672|GO:0006468
Tsu01g01357 894 Gene3D Transferase(Phosphotransferase) domain 1 800 894 - -
Tsu01g01357 894 Pfam Protein kinase domain 722 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01357 894 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 178 - -
Tsu01g01357 894 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 179 893 - -
Tsu01g01357 894 ProSiteProfiles Protein kinase domain profile. 721 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01357 Tsu-Chr1 12876349 12879152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01357 3 894 Receptor kinase-like Gene Family AT4G08850 41.895 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu01g01357 Pkinase 2.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01357 - - mtr:MTR_1g040615 969.918