Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01355 ATGTTTTTGAACGATAATAACAATACTAACGGTTACAACCACCATCAACCACCGCCACCGTCACCGCCGCCGGGAATGTTGCAAACTCATAGTCACCATGACCGTGCTCGCCGTGGCACTCGCCGTTCACGTGCTTCTAGTTCTAATTCTAATTCCATTGTTAGGGTTTCCGATACCGAACAACAACCGCCACAAGAAcaactacaacaacaacaacctaaTCGATCTCCTTGCACCGATTACGATATGGCGTATTTTCATTCCTATGCTCATCTCGGTATTCACCAAGAAATGATCAAGGATCGTGTGCGGACAGAAACTTATAGGGAAGCAATTATGCGGCATCAGGATTCTATTGCTGGCAAAGTCGTAGTTGATGTTGGATGTGGTACAGGAATCCTTTCCATATTTTGTGCTCAGGCTGGCGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATTGCTCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTTTCTGATGTTATCATCGTATTGCATGGACGAGTTGAGGATGTTGAAATCGATGAAGAGGTGGACGTTATAATTTCAGAATGGATGGGCTATATGCTACTATATGAGAGCATGCTTGGGAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTTATTTTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACTGACAGATACAGTGACAGTGTCGACTTTTGGCGCAATGTGTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAATGTGCATTTGAGGAACCTTCTGTTGAGACAATAACTGGTGAAAATGTTCTGACATGGCCACATGTGGTAAAATATCTTGATAGTTATACTGTTACGATCAGCGAGTTAGAAACTGTAACGTCGAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTTAATGTGCCTACGATAGCACCAACATCAGTTATCGAAAGTCATCAGGTGAATGGTAGTTTGAGAAAAAGGCGAACAAACCCAAGCGAAGCACTTGTACTATCCACTGCACCGGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTTTATGATCCTATTGAGCTGGAACAAGATCAAGTAATTGAAGGTTTAGTGACGTTGACACAGAGCAAAGAAAATGCCCGGTTTATGAATATTCACCTGGAATACACTTCAGGTAATCGGTCGTATGTGAAAGAGTCTGTTATGAGATGA 1284 0.4221 MFLNDNNNTNGYNHHQPPPPSPPPGMLQTHSHHDRARRGTRRSRASSSNSNSIVRVSDTEQQPPQEQLQQQQPNRSPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQDSIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLIFPSSATLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENVLTWPHVVKYLDSYTVTISELETVTSKFKFNSMMRAPLHGFAFWFDVEFNVPTIAPTSVIESHQVNGSLRKRRTNPSEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01355 427 Pfam Ribosomal protein L11 methyltransferase (PrmA) 120 194 - -
Tsu01g01355 427 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 417 IPR029063 -
Tsu01g01355 427 CDD AdoMet_MTases 124 223 - -
Tsu01g01355 427 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 30 424 IPR025799 GO:0016274|GO:0018216
Tsu01g01355 427 MobiDBLite consensus disorder prediction 1 79 - -
Tsu01g01355 427 MobiDBLite consensus disorder prediction 43 78 - -
Tsu01g01355 427 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 82 410 IPR025799 GO:0016274|GO:0018216
Tsu01g01355 427 Gene3D Vaccinia Virus protein VP39 79 224 IPR029063 -
Tsu01g01355 427 PANTHER BNAC03G41340D PROTEIN 30 424 - -
Tsu01g01355 427 Gene3D - 226 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01355 Tsu-Chr1 12850887 12859959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01355 85 393 C2H2 Transcription Factor Family AT3G12270 40.123 3.62e-66 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01355 K11437 - gmx:100809174 647.121