Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01343 ATGTCAATTAGTTCGGCACGTTGTTGCCAAAGGCACTATATTCCAAAACATTTGTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGGTAGCTTTGGAAAATCTTAAGAAATTCTTGTTCAATTGTATAATTTATTCCAAAGGTGTTGAAGAGAAAGGAAGATTGAGAAGCGGTGAAAATGTCGATGAAAGTCATTCTTTTGGCTTGCTAAAAGCATTAATAAAGGAAGGCTTGGGAAAGGAGGAAATGATTGAAAATGAGAAGTATATTAGAGACACCGCACTCAATCTCTTGGTTGCAGGTAATGGAACAATTACGTCGGGTTTAAGTTGGTTGTTTTGGCTTGTTTCAACTCATCCTATTGTGGAAGCTAAAATCATTCAAGAGATTAAAGATAATTTTCCAACACAAGAGGATAACTTGAACAATAATTTAAATGTAGAAAAGCTTGATAAGCTAGTTTACCTCATGCAGTTATATGTGAAGCCTTAA 507 0.3491 MSISSARCCQRHYIPKHLWKLQKWLQIGQEKKNKVALENLKKFLFNCIIYSKGVEEKGRLRSGENVDESHSFGLLKALIKEGLGKEEMIENEKYIRDTALNLLVAGNGTITSGLSWLFWLVSTHPIVEAKIIQEIKDNFPTQEDNLNNNLNVEKLDKLVYLMQLYVKP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01343 168 PANTHER CYTOCHROME P450 9 161 - -
Tsu01g01343 168 SUPERFAMILY Cytochrome P450 11 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01343 168 Pfam Cytochrome P450 28 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01343 168 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 161 - -
Tsu01g01343 168 Gene3D Cytochrome P450 3 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01343 Tsu-Chr1 12742461 12744412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01343 11 161 Cytochrome P450 AT1G57750 37.255 2.70e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01343 - - cam:101494575 177.178