Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01340 ATGTCATTGTTTCAGTATATTTCATTATTTGTAGCCATCCTCTTTGTATTCTACAATATATggagatacaaaaaaaatgaacttgtaCCAAATTGGCCAATAATTGGCATGCTACCTTCACTTTTCCATAATCTATCCAATATTCATGATTTTGTAACCTTGGGATTGAAACATCATGGAAGCACTTCTAAGTTTAAAGGACCTTGGTTCACAAACATTGCCAATTTTATCATCACTAGTGACCCCATGAATGTGCATCACATCACTAGCAAGAATTTCACCAACTATGATAAGGGATCTGATTTCCATGAGATTTGTGAAGTTTTGGGTCTTGGTATTTTCAATTTGGGTTCCAATGAATGGAAACAAGAGAGGACACTACTTCATTCATTgctcaaaagaaaaagttttgagaCATCCCTTCAACAAAACATTCAAAAGAAGCTAGAGAATTGCCTTTTACCATTTCTtgatcatcaagcatcaaaaagtGTACAAGTACTTGATTTACAAGATATTCTTGAGAGGTTCACATTTGATATTACTTGtacatttttatttggatttgatcCTAATTGCCTTCCATACAATTTCAATGAGTTCTCATTAGATATTGCACATGTAAAAGCTATTTCTGTGCTTGAGGATACAATATTGTCTAGGCACTATATTCCAAAACATTTGTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGGTAGCTTTGGAAAATCTTAACAAATTTTTGTTCGATTGTATAACTTATTCCAAAGGTGTTGAAGAGAAAGGAAGATTGAGAAGCAGTGAAAATGTCGATGAAAGTCATTCTCTTGGCTTGCTAAAAGCATTAATAAAGGAAGGCTTGGGAAAGGAGGAAATGGTTGAAAATGAGAAGTATATTAGAGACACCGCACTCAATCTCTTGGTTGCAGGTAATGGAACAATTACGTCGGGTTTAAGTTGGTTGTTTTGGCTTGTTTCAACTCATCCTAATGTGGAAGCTAAAATCATTCAAGAGATTAAAGATAATTTTCCAACACAAGAGGATAACTTGATCAATAATTTAAATGTAGACAAGCTTGATAAGCTAGTTTACCTTCATGGAGTTATATGTGAAGCCTTAAGGCTTTATCCTCCTATACCATTTGAGCACAAGTGTTCAATCAAATCAGACATACTACCAAGTGGAGTTCGTGTTAAACCAAATACAAAGTTAATATACTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGCGAGGATTGCTTGGAATTTAAGCCTGAGAGATGGATATCGAATACAggaaaaattaaacatttaccGTCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGATATTAGTTTTGTTCAAATGAAAATGGTTGCAGCTGCTGTGTTATGGAAGTTTCACATACAAGTGGTGGAAGGTCAATCTATTACTCCAAGGATTTCTATGGTTCTTCGTATGGAAGGGCTTAAGGTCAATGTTAGTAAAAGAAGCATTTGA 1545 0.3275 MSLFQYISLFVAILFVFYNIWRYKKNELVPNWPIIGMLPSLFHNLSNIHDFVTLGLKHHGSTSKFKGPWFTNIANFIITSDPMNVHHITSKNFTNYDKGSDFHEICEVLGLGIFNLGSNEWKQERTLLHSLLKRKSFETSLQQNIQKKLENCLLPFLDHQASKSVQVLDLQDILERFTFDITCTFLFGFDPNCLPYNFNEFSLDIAHVKAISVLEDTILSRHYIPKHLWKLQKWLQIGQEKKNKVALENLNKFLFDCITYSKGVEEKGRLRSSENVDESHSLGLLKALIKEGLGKEEMVENEKYIRDTALNLLVAGNGTITSGLSWLFWLVSTHPNVEAKIIQEIKDNFPTQEDNLINNLNVDKLDKLVYLHGVICEALRLYPPIPFEHKCSIKSDILPSGVRVKPNTKLIYSLYAMGRMEQIWGEDCLEFKPERWISNTGKIKHLPSYKFIAFNAGPRSCLGKDISFVQMKMVAAAVLWKFHIQVVEGQSITPRISMVLRMEGLKVNVSKRSI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01340 514 Pfam Cytochrome P450 30 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 Gene3D Cytochrome P450 22 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 SUPERFAMILY Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01340 514 PANTHER CYTOCHROME P450 10 510 - -
Tsu01g01340 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 510 - -
Tsu01g01340 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01340 Tsu-Chr1 12719570 12721326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01340 9 513 Cytochrome P450 AT2G23180 41.292 3.05e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01340 - - cam:101494575 675.241