Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01339 ATGATACCATCAGTTTTGCATAATCTATCCAATATTCATGATTTTGTAACCTTGGGATTGAAACATCATGGAGGCACTTCTGAGTTTAAAGGACCTTGGTtcacaaacattgctaacttTATCATCACTAGTGACCCCATGAATGTGCACCACATCACTAGCAAGAATTTCACAAACTATGGTAAAGGATCTGATTTCcatgaaatattttttgaagttttgggTCTTGCTATTTCCAATTTGGATTCCAATGAATGGAAACAAGAGAGGACACTACTTCATTCATTgctcaaaagaaaaagttttgagaCATCCCTTCAACAAAACATTCAAAAGAAGCTAGAGAATTGCCTTTTACCATTTCTTGaacatcaagcatcaaaaagtGTACAAGTACTTGATTTAGAAGATATTCTTGAGAGGCACTATATTCCAAAACATTTGTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGGTAGCTTTGGAAAATCTTAACAAATTCTTGTTCAATTGTATAATTTATTCCAAAGGTGTTGAAGAGAAAAGAAGATTGAGAAGCGGTGAAAATGTCGATGAAAGTCATTCTCTTGGCTTGCTAAAAGCATTAATAAAGGAAGGCTCGCGAAAGGAGGAAATGGTTGAAAATGAGAAGTATATTAGAGACACCGCACTCAATCTCTTGGTCGCAGGTAATGGAACAATTACTTCAGGTTTAAGTTGGTTTTTTAGGCTTGTTTCAACTCATCCTAATGTGGAAGCTAAAATCATTGAAGAGATTAAAGATAATTTTCCAACACAAGAGGATAACTTGATCAATAATTTAAATGTAGAAAAGCTTGATAAGCTAGTTTACCTTCATGGAGTTATATGTGAAGCCTTAAGGCTTTATCCTCCTATACCATTTGAGCACAAGTGTTCAATCAAATCAGACATACTACCTAGTGGAGTTCGTGTTAAACCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGCGAGGATTGCTTGGAATTTAAGCCTGAGAGATGGATATCGAATACAGGAAAAATTAAACATGTACCGTCTTACAAGTTCATAGCATTTAATGCAGGTCCAAGAAGCTGTTTGGGAAAAGATATTAGTTTTGTTCAAATGAAAATGGTTGCAGCTGCTGTGTTATGGAAGTTTCACATACAAGTGGTGGAAGGTCAATCTATTACTCCAAGGATTTCTATGGTTCTTCGTATGGAAGGGCTTAAGGTCAATGTTAGTAAAAGAAGCATTTGA 1305 0.3326 MIPSVLHNLSNIHDFVTLGLKHHGGTSEFKGPWFTNIANFIITSDPMNVHHITSKNFTNYGKGSDFHEIFFEVLGLAISNLDSNEWKQERTLLHSLLKRKSFETSLQQNIQKKLENCLLPFLEHQASKSVQVLDLEDILERHYIPKHLWKLQKWLQIGQEKKNKVALENLNKFLFNCIIYSKGVEEKRRLRSGENVDESHSLGLLKALIKEGSRKEEMVENEKYIRDTALNLLVAGNGTITSGLSWFFRLVSTHPNVEAKIIEEIKDNFPTQEDNLINNLNVEKLDKLVYLHGVICEALRLYPPIPFEHKCSIKSDILPSGVRVKPNTKLIYSLYAMGRMEQIWGEDCLEFKPERWISNTGKIKHVPSYKFIAFNAGPRSCLGKDISFVQMKMVAAAVLWKFHIQVVEGQSITPRISMVLRMEGLKVNVSKRSI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01339 434 PRINTS P450 superfamily signature 235 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PRINTS P450 superfamily signature 372 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PANTHER CYTOCHROME P450 4 141 - -
Tsu01g01339 434 PANTHER CYTOCHROME P450 128 430 - -
Tsu01g01339 434 Pfam Cytochrome P450 185 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 Gene3D Cytochrome P450 11 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 374 383 IPR017972 GO:0005506|GO:0016705
Tsu01g01339 434 SUPERFAMILY Cytochrome P450 11 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 141 - -
Tsu01g01339 434 PANTHER CYTOCHROME P450 FAMILY PROTEIN 128 430 - -
Tsu01g01339 434 PRINTS E-class P450 group I signature 224 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PRINTS E-class P450 group I signature 244 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PRINTS E-class P450 group I signature 292 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PRINTS E-class P450 group I signature 371 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01339 434 PRINTS E-class P450 group I signature 381 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01339 Tsu-Chr1 12705074 12706513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01339 1 433 Cytochrome P450 AT2G23180 38.669 6.52e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01339 - - cam:101494575 571.237