Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01336 ATGGATAAAATGTTTTCTTCCTTGGTTTTGATAATTCTATCTATTTCATCATTGGCTTCATCACTTCAAGTTGGTTTCTATGGCTACACATGTCCATCTGCTGAGGAAATAGTGAGAAGTACAGTTAACAAAGCTATTTCACTCAATCCTGGCATAGGTGCTGGATTGATCAGAATGCATTTTCATGATTGCTTTGTGAGGGGTTGTGATGCTTCTGTGTTGCTAGCATCAACACCGGGAAATGTAGCCGAAAGAGACAACTTTATCAACAATCCAAGCTTACGCGGCTTCGATGTAATCAACGAAGCCAAGGTTCAATTAGAATCCGCATGTCCACAAACAGTATCGTGTGCGGACATTCTTACCTTCGCAACACGAGACAGCATTCTCAAACTCAGTGGTGGCACTATAAACTACGACGTACCATCAGGACGAAGAGACGGCCGTGTCTCAATCGCTGATGATGTGCCAAAAAATCTACCCGGACCTTCCTTCACTGCGGACCAACTTATcgaaaatttcaaacaaaaaggTTTGTCAGCCGATGAAATGGTTACACTATCAGGAGCACATTCAATTGGTTTGTCGCattgttcttcattttctaaTCGTTTATATTCATTTAGTGGTGCAAATTCTCAAGATCCTTCTATGGATCCTTCATATGTTGAATCTTTGAAAACAAAGTGTCCACCACCACCAAGTAGCAATGATCCATTAGTTGTGCTTGATGTTACTACTCCTAATCGTTTGGATAATGAGTACTATAATGGATTGATTAATCATCGTGGTTTGTTTAATTCAGATCAAACACTATTAAGTAGTCAATCTACACAAGAAAGTGTGCTAAGTAATGCTAATTATGGTTCAAATTGGGTTAACAAGTTTGCACAAGCAATGGTGCATATGGGTTCTATTGATGTGTTAAGTGGCTATGATGGTGAGATTAGGAAAGATTGCAGCTTTGTCAATTAG 975 0.3826 MDKMFSSLVLIILSISSLASSLQVGFYGYTCPSAEEIVRSTVNKAISLNPGIGAGLIRMHFHDCFVRGCDASVLLASTPGNVAERDNFINNPSLRGFDVINEAKVQLESACPQTVSCADILTFATRDSILKLSGGTINYDVPSGRRDGRVSIADDVPKNLPGPSFTADQLIENFKQKGLSADEMVTLSGAHSIGLSHCSSFSNRLYSFSGANSQDPSMDPSYVESLKTKCPPPPSSNDPLVVLDVTTPNRLDNEYYNGLINHRGLFNSDQTLLSSQSTQESVLSNANYGSNWVNKFAQAMVHMGSIDVLSGYDGEIRKDCSFVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01336 324 Pfam Peroxidase 38 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 Gene3D - 25 324 - -
Tsu01g01336 324 PANTHER PEROXIDASE 25-RELATED 13 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 SUPERFAMILY Heme-dependent peroxidases 22 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Tsu01g01336 324 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Tsu01g01336 324 Gene3D Peroxidase, domain 2 161 303 - -
Tsu01g01336 324 ProSiteProfiles Plant heme peroxidase family profile. 21 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PANTHER PEROXIDASE 13 322 - -
Tsu01g01336 324 CDD secretory_peroxidase 23 323 IPR033905 GO:0004601|GO:0042744
Tsu01g01336 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01336 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01336 Tsu-Chr1 12657295 12658573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01336 5 324 Peroxidase AT4G11290 45.399 1.62e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01336 K00430 - gmx:100786791 459.529