Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01332 ATGGTGTTTCTTAATTTCCATGAAATGTGGAAACCAGTTTTGGTTATGATTATAGTTAATTTAGCTTTAGCCTTTGTCAATGTATTTCTGAAGAAAGTTCTTAGTGAAGGAATGGATCAATTAACCATTTTAACATTTAGACAAGCAATTTCAGCAATTTTCTTAGCACCTATTGCTTGCATCTTTGAAAGggaAAGCAAGATAAATGGACATGTAATAGGTCTCCTTTTCTTTAGTGCTCTAGTAGGTGCAACACTGACTCAGTACCTCTTTCTCGTTGGACTTGAATATACATCGGCAACATTCTCATGTGCATTCCTCAATACGGTGCCTGTCTTCACGTTCATTATGGCTCTCCCAATGGGGATGGAGAAAGTGAACATGAAAAACAAGAGTGGTAAAGCCAAAATCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGGTATTGATCCTTTATAAAGGAATGCCCATAATcaacccacaatctcatcacatAGCCACAACAACATCAGCTGCAGCATCAAACTTAAAGAAATGGATTATAGGTTCAATATTTCTGACTGCAGGTTGCCTTTTGTGGTCTTCATGGTTTCTTATACAAGAAAGGGTTGGCAAAAAGTATCCATATCAATACTCTAGCACAGCCATTTTGTCACTCTTTGCTACCATTCAATCAGCAATATTGAATTTGATTGTCCATAGAAACAATGCCATATGGATTCTCAAAGGAAAGCTACAAATATTGACTGTTGTATATTCTGGGCTGGTTGGAACAGGATTGTGCTATGTGGCAATGGCATGGTGTGTTAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCACTTTTACAGATGTTTGTGGTTGTTCTTGATCTCTGGATATTAAAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAGTCTTGGTTATTTCTGGCATGTATATGCTCCTATGGGGTAAAAGTAAAGATAGAGGACAGTGTGCCTTGAAGGACactcaagaaaatcaaaaggatGAAGAATGTCACTAA 1038 0.3603 MVFLNFHEMWKPVLVMIIVNLALAFVNVFLKKVLSEGMDQLTILTFRQAISAIFLAPIACIFERESKINGHVIGLLFFSALVGATLTQYLFLVGLEYTSATFSCAFLNTVPVFTFIMALPMGMEKVNMKNKSGKAKILGTFVCIGGALVLILYKGMPIINPQSHHIATTTSAAASNLKKWIIGSIFLTAGCLLWSSWFLIQERVGKKYPYQYSSTAILSLFATIQSAILNLIVHRNNAIWILKGKLQILTVVYSGLVGTGLCYVAMAWCVKQRGPVFTAAFTPLLQMFVVVLDLWILKEEIYLGSVVGSVLVISGMYMLLWGKSKDRGQCALKDTQENQKDEECH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01332 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Tsu01g01332 345 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Tsu01g01332 345 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Tsu01g01332 345 PANTHER WAT1-RELATED PROTEIN 10 345 - -
Tsu01g01332 345 PANTHER WAT1-RELATED PROTEIN 10 345 IPR030184 GO:0016021|GO:0022857
Tsu01g01332 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01332 Tsu-Chr1 12617832 12620881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01332 1 326 Nodulin-like Gene Family AT1G11460 39.697 1.28e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01332 - - gmx:100794199 525.398