Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01328 atgaagaatcTCGATCTCCCTATAACCGATTCACACTCTTCCCATTCCTTAACCTTCGAACAAGACACATCTTCAATCTCCGATCAACCCGCCGATAAATCATCGTACGGTTTAAACCTCCGTTCCaccgacaacaacaacaaacagcAATCAGATGTTGTTGATGCACAGCGGCCACGTGCTTCAGTCGAGGTTTCGATGTTGCAGAAATTCAAGGAGGATATGGATAGACTTCCAGCTGATCAAGGTTTTGATGAGTATATCGATGTCCCTGTTGATGGTTTCGGTGCAGCGCTTCTTGGTGGGTATGGATGGAAAGAAGGAATGGGAATTGGGAAAAATGCTAAGGAGGATATTAAGGTTGTTGAGGTTAAGAGGAGGACTGCTAAGGAAGGTTTGGGTTTTGTTGCTGATATGCCTCCTCCTACGTCGAAGAAAGGTGAAAGGAATGGGAAGTTGGAGAgtgagaagaggaagaaggagGAGAGAGTTGTTAGGATTGTTAGAGGTAGGGATGTTGGATTGAAGGCTAGTGTTGTTGGTAGAATTGGGGATGATGTTcttgttttgaagattttaggGAGTAGTGATAAAGTTGAGGTTAAGGTAGATGATGTTGCTGAATTGGGTTCTGTTGAGGAAGATAGGTGTTTGAGAAAGTTGAAGGATTTGAAGATTCGTGGGAGGGATGAGGAAAAAGGGTCGAGGAGTAAGCATGACGAAGAAAAAGGGTCGAGGAGTAAGCGTGACGAGGAAAAAGAGTCCCGAAGTAAGCGTGGGAGGGATGAGGTTGAGGAGAGGAGAGTGACTGGTAATGGTGGTGGTAATGAAGAGAAGGGGAAGAAACAGGTTTCTTGGCTTACAAGTCATATTCGGGTTAGAGTGGTTAGTCGAAGTTTCAAAGGGGGGagattttatttgaagaaagGAGAGGTCTTGGATGTTATTGGGCCTACTACTTGTGATATATCTATGGATGAGAGTAGGGAGATTATTCAAGGGGTGTCGCAAGATATGCTCGAGACGGCTATTCCACGACGAGGTGGACCTGTTCTTGTGTTGTCTGGGAAACATAAAGGTGCCTTTGGGAGTCTTGTTGAGAGGGATTTGGATAGGGAGATTGGTATAGTTAGGGATGTTGATACTCATGAGATGCTCAGTGTCAAACTTGAGCATATGGCAGAGTATATTGGGGACCCAAGCTTATTGGGACATTGA 1218 0.4195 MKNLDLPITDSHSSHSLTFEQDTSSISDQPADKSSYGLNLRSTDNNNKQQSDVVDAQRPRASVEVSMLQKFKEDMDRLPADQGFDEYIDVPVDGFGAALLGGYGWKEGMGIGKNAKEDIKVVEVKRRTAKEGLGFVADMPPPTSKKGERNGKLESEKRKKEERVVRIVRGRDVGLKASVVGRIGDDVLVLKILGSSDKVEVKVDDVAELGSVEEDRCLRKLKDLKIRGRDEEKGSRSKHDEEKGSRSKRDEEKESRSKRGRDEVEERRVTGNGGGNEEKGKKQVSWLTSHIRVRVVSRSFKGGRFYLKKGEVLDVIGPTTCDISMDESREIIQGVSQDMLETAIPRRGGPVLVLSGKHKGAFGSLVERDLDREIGIVRDVDTHEMLSVKLEHMAEYIGDPSLLGH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01328 405 MobiDBLite consensus disorder prediction 1 56 - -
Tsu01g01328 405 ProSiteProfiles G-patch domain profile. 92 138 IPR000467 GO:0003676
Tsu01g01328 405 Gene3D - 290 344 - -
Tsu01g01328 405 PANTHER G PATCH AND KOW-CONTAINING 1 403 IPR045166 GO:0000398
Tsu01g01328 405 Pfam G-patch domain 79 137 IPR026822 -
Tsu01g01328 405 SMART kow_9 344 371 IPR005824 -
Tsu01g01328 405 SMART kow_9 158 185 IPR005824 -
Tsu01g01328 405 MobiDBLite consensus disorder prediction 229 283 - -
Tsu01g01328 405 MobiDBLite consensus disorder prediction 1 60 - -
Tsu01g01328 405 MobiDBLite consensus disorder prediction 134 157 - -
Tsu01g01328 405 SMART G-patch_5 90 136 IPR000467 GO:0003676
Tsu01g01328 405 MobiDBLite consensus disorder prediction 229 275 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01328 286 372 C2H2 Transcription Factor Family AT1G55460 32.184 1.42e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01328 K13101 - gmx:100784983 437.573