Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01314 ATGGACACACTCAACTCCATACTCTTCATTCTCTTCACCTTCATTTTCCTCAAATTCTTCCATTCTCTTCTCTCAAAACACAAACCACCACTTCCACCTGGTCCACGTGGCCTTCCCATCATAGGTAACCTCCATCAACTAGGACAAAACCCCCACAAAACCTTAACCAATCTCTCCAAAACACATGGCCCAATAATGTCCCTAAAATTGGGCCAAATAACCACCATAGTTATGTCTTCACCAGAAACTGCAAAATCAGTTCTTCAAATCAATGACCAATTTCTTTCAAACAGAAAAATACCTGATGCCTTGAAAGCTGCTAATATCCATAATTATAGTTTACCCTTTTTACCTATTTGTCAACGTTGGAAAGACCTAAGAAAAACATGCAACAACcttttattttctaataaaaatctCGATTCGAATGAAACACTTCGAAGCCAGAAGATTATAGAACTTTATGACGAAATAAATGATCGTGTTGCAAAATTTGAAGCAGTTAATATTGGAAGGTTGGCTTTTAAGACGACTATTAATATGTTGTCGAATACAGTTTATTCAGTTGATTTAGTTGGGTCGAGTGATAAAGCCGGAGAGTTTAAGGAGTTTGTTACGAAGATTATGAAGGAAGTTGGAAGAGTGAATATCGCAGATTGTTTTCCGATTTTGAAGGTTTTGGATCCTATTGGGATTAGAAGAAGGGTTGGTGAGTATTTTGCGAAGTTGTCAAAGATTTTTGGAGAGTTGGTTGATGAAAGGTTGAAGATGAGGGAGTTGAAAGGTTATTGTAGGAAAAGTGATATGTTAGATGCTATGCTTGATGATGAGAATAATATTGGGGAGAAGTATGACGATAAGATTGCACGTTTATCTGCGGACTTGTTTGTAGCAGGAACTGACACAATAACTTCAACAATAGAATGGACAATGACTGAATTACTTCGCAACCCAAAAGTTATGTCAAAAGCAAAAGAAGAGTTAAGTCAAATTATTGGCAAAGGAAAATTGGTTAAAGAATCAGACATAACAAAACTCCCTTATTTACAAGCAATAGTAAAAGAAACTTTTAGATTACATCCAGCAGTTCCATTTTTACTACCAAGAAAAGCTGAAAATGACTTAGAAATTAATGGCTATAAGGTCCCAAAAAATGCACAAGTTTTTGTTAATGTTTGGGCTATTGGAAGAGATTCAAATATATGGGACAACCCTAATGAATTTTTGCCTGAAAGATTTTTGGGGTCagaaattgattttaaaggtAGAAATTTTGAGTTGACACCATTTGGTGGTGGGAGAAGATTATGTCCTGGATTACCATTAGCTATAAGGATATTATTTTTGATGTTAGGTTTGTTTATTAATTGTTTTGATTGGAAACTTGATGGTGGGATTAAAGCCGAGGATATGAATATGGATGATAAATTTGGACTTACTTTGGAGAAAGCTCAAGCTTTATTAGCTGTTCCAATTAAGGTTTTGTCATCTTAA 1494 0.3467 MDTLNSILFILFTFIFLKFFHSLLSKHKPPLPPGPRGLPIIGNLHQLGQNPHKTLTNLSKTHGPIMSLKLGQITTIVMSSPETAKSVLQINDQFLSNRKIPDALKAANIHNYSLPFLPICQRWKDLRKTCNNLLFSNKNLDSNETLRSQKIIELYDEINDRVAKFEAVNIGRLAFKTTINMLSNTVYSVDLVGSSDKAGEFKEFVTKIMKEVGRVNIADCFPILKVLDPIGIRRRVGEYFAKLSKIFGELVDERLKMRELKGYCRKSDMLDAMLDDENNIGEKYDDKIARLSADLFVAGTDTITSTIEWTMTELLRNPKVMSKAKEELSQIIGKGKLVKESDITKLPYLQAIVKETFRLHPAVPFLLPRKAENDLEINGYKVPKNAQVFVNVWAIGRDSNIWDNPNEFLPERFLGSEIDFKGRNFELTPFGGGRRLCPGLPLAIRILFLMLGLFINCFDWKLDGGIKAEDMNMDDKFGLTLEKAQALLAVPIKVLSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01314 497 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 494 - -
Tsu01g01314 497 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Tsu01g01314 497 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 494 - -
Tsu01g01314 497 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 Pfam Cytochrome P450 32 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 SUPERFAMILY Cytochrome P450 32 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01314 497 Gene3D Cytochrome P450 22 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01314 Tsu-Chr1 12412911 12415307 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01314 8 493 Cytochrome P450 AT2G45550 45.892 3.96e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01314 - - lja:Lj2g3v0039250.1 632.484