Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01311 atggACACACTCAACTCCATACTCTTCATTCTCTTCACCTTCATCTTCCTCAAATTCTTCTATTCTCTTCTCTCAAAACACAAACCACCACTTCCACCCGGTCCACGTGGCCTTCCCATCATAGGTAACCTCCATCAACTAGGACAAAACCCCCACAAAACCTTGACCAATCTCTCCAAAATCCATGGCCCAATAATGTCCCTAAAATTGGGCCAAATAACAACCATTGTTATGTCTTCACCAGAAACTGCAAAATCAGTTCTTCAAACCAATGACCAATTTCTTTCTAACAGAAAAGTACCTGATGCCATGAAAGGTGCTAACCACCATAATTATAGTTTACCATTTTTACCTATTTGTCAACGTTGGAAAGACCTAAGAAAAACATGCAACAACCTTTTGTTTTCCAGCAAAAACCTCGATTCGAATCAAATACTTCGAAGccaaaagattatagaactttATGATGATATAAATGATAGTGCTGCAAAATTTGAAGCAGTTAATATTGGAAGATTGGCTTTTAAGACAACTATTAATATGTTGTCGAATACGGTTTATTCAGTTGATTTGGTTCGATCGAGTGATAAGGCCGGGGAATTTAAGGAGTTGGTTACTAAGATTATGAAGGAAGTTGGAAGAGCGAATATCGCGGATTGTTTTCCGGTTTTGAAGGTTTTGGATCCTATTGGGATTAGAGGAAGGGTTGGTGAGTATTTTGGGAAGTTGTTGGAGATTTTTGGAGAGTTGGTTGATGAAAGGTTGAAGATGAGGGAGTTGAAAGGTTATTGTAGGAAAAGTGATATATTGGATGCTATGATTGATGATGAGAATAATATTGGGGAGAAGTATAAAGATAAGCTTGAACGTTTATCTGTGGACTTAATTGTAGCAGGAACTGACACAAACGATAATGTTAGAATTCCAAGTCAAGTTGTACAGGCACCTTTTGATCATTGGAGTGAGTGGTTTGCTGTTCATAAGTTGCAGAGTACTGATGATCATTATGTCCCGCCTTTTTGCACAGAACGGTGGGAAAGGTCTCGTATAGACTGGTTAAAATTCAATGTAGATGcatctttttttgttgactCGAGAAGGACAACAATGGATGCTAGTTTTCGTAATAGCTCCGGTGAGTTTACTGCTGGATTCACACAGTGGCAGCATATGATTTTATCAACAGAGGATGGTGAAGCATGA 1203 0.3757 MDTLNSILFILFTFIFLKFFYSLLSKHKPPLPPGPRGLPIIGNLHQLGQNPHKTLTNLSKIHGPIMSLKLGQITTIVMSSPETAKSVLQTNDQFLSNRKVPDAMKGANHHNYSLPFLPICQRWKDLRKTCNNLLFSSKNLDSNQILRSQKIIELYDDINDSAAKFEAVNIGRLAFKTTINMLSNTVYSVDLVRSSDKAGEFKELVTKIMKEVGRANIADCFPVLKVLDPIGIRGRVGEYFGKLLEIFGELVDERLKMRELKGYCRKSDILDAMIDDENNIGEKYKDKLERLSVDLIVAGTDTNDNVRIPSQVVQAPFDHWSEWFAVHKLQSTDDHYVPPFCTERWERSRIDWLKFNVDASFFVDSRRTTMDASFRNSSGEFTAGFTQWQHMILSTEDGEA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01311 400 Pfam Cytochrome P450 32 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01311 400 SUPERFAMILY Cytochrome P450 24 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01311 400 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 303 - -
Tsu01g01311 400 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01311 400 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01311 400 Gene3D Cytochrome P450 22 306 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01311 400 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01311 Tsu-Chr1 12363968 12372990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01311 8 305 Cytochrome P450 AT2G45550 37.419 4.04e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01311 - - lja:Lj2g3v0039250.1 332.413