Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01301 ATGAGTTCCAAttctaaacaaaataataatcttCCTTTTAATGAGGTAGAAAAGGTTGACGATGCTTACCTTTCAGCATTGATATTATGTTTTAGTAGGATTTTTCCAGCAATACTAAATGCTGCTGTTGATCTCAATTTATTTGATATCATAGCTAAGTTACAAAATTCAAGTAGTACTAATAATTCAAGCTTTTCTGCTTCTGAAATTGCTTCTCAACTTCCAAATCAACACAATGAATTGGTTGAGAGGCTTGAACGCATGTTGAATGTGTTGGCTAGCCATTCTCTTCTTGATTGTTCAATCCGTACAAATGAAGATGGTAAGAGAGAAAGAGTTTTTGCTCTCTCTTCAATTGGTATATACTTTGCAATTGATAAAGATGGAGGCTCTTTGGGTCCACTTTCAACATTAATCCATAGAGGATGTAATAGTGTTTgGGGTGATACAAAGGAAGCAATTTTGGATCCTGATGTGAAAACTCTTTTCCAAAGTATCAATGGGAAATCATTTTATCAATATACAAAGACAAATAATGAATTGAATGATATTACTAACAAAGCAATGGCTCATGCTGGACCGTTAGAGATTAAAAGAGTCCTAAAATTATATAAAGGATTTGAGGGAATCTCAACATTGGTTGATGTTGGAGGTGGATTAGGAGAGACCTTAAATTTCATTATATCTCAATATCCTTCAATTAAAggaattaattttgatttgcaACAAGCCATTCAAGACGCACCTTCTCACCCAGGGATAGAACATATTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTACTAAAGCTTGCAATGCACAACCCTTCCATAACCCATCATAATTATGCAGTGAAAGCACTACAGTTACCAACACCTTTGGCAAAACCTCCCAACCATTCCCTTTGA 921 0.3398 MSSNSKQNNNLPFNEVEKVDDAYLSALILCFSRIFPAILNAAVDLNLFDIIAKLQNSSSTNNSSFSASEIASQLPNQHNELVERLERMLNVLASHSLLDCSIRTNEDGKRERVFALSSIGIYFAIDKDGGSLGPLSTLIHRGCNSVWGDTKEAILDPDVKTLFQSINGKSFYQYTKTNNELNDITNKAMAHAGPLEIKRVLKLYKGFEGISTLVDVGGGLGETLNFIISQYPSIKGINFDLQQAIQDAPSHPGIEHIGGDMFESVPTGDAILLKLAMHNPSITHHNYAVKALQLPTPLAKPPNHSL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01301 306 Gene3D Vaccinia Virus protein VP39 125 301 IPR029063 -
Tsu01g01301 306 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 306 IPR016461 GO:0008168
Tsu01g01301 306 PANTHER O-METHYLTRANSFERASE 1 279 IPR016461 GO:0008168
Tsu01g01301 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 279 IPR029063 -
Tsu01g01301 306 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
Tsu01g01301 306 PIRSF O-mtase 3 293 IPR016461 GO:0008168
Tsu01g01301 306 Pfam Dimerisation domain 38 93 IPR012967 GO:0046983
Tsu01g01301 306 Gene3D - 2 123 IPR036388 -
Tsu01g01301 306 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 279 - -
Tsu01g01301 306 Pfam O-methyltransferase domain 147 279 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01301 Tsu-Chr1 12232742 12236072 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01301 20 284 Monolignol Biosynthesis Gene Families AT5G54160 41.729 2.04e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01301 - - aprc:113869089 358.992