Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01293 ATGAATGTGCATCACATCACTAGCAAGAATTTCAGCAACTATGGTAAAGGGACTGATTTCCATGAGATTTTTGAAGTTCTTGGTGTTGGTATTTTCAATTTGGATTCTGATGAATGGAAACAAGAAAGGAAAATGCTTCATTCATTGTTCAAAAGGAAAAGCTTTGAGATATTCATTCAAGAAAACATTCAAAAGAAGCTAGAGAATTGCCTTATACCATTTCTTGAGCATGCATCCAAAGGTATGCAAGTATTTGATTTACAAGATATTCTTGAGAGATTCACCTTTGATATTACTTgtacttttttatttggatttgatcCTAATTCCCTTCCTTACAAGTTCGACGAGTTCTCCGATATAGCTTATATAAAAGCCATTTCTGTGCTTGAGGATACAGTACTTTCCAGACACTATATTCCAAAATGTATTTGGAAGCTAAAAAAGTGGCTACAAATTGGTCAAGAGAAGAAAAACATGGTAGCTCAAGAAAATATTCACCAATTCTTGCACCATTGTATAAGAAGAAACAAAGATGTGGATGAAAGTCATTCTTCCTTGCTAAAAGAGATAATAAAGAAATGCTCCGAAAATGGTGAAATTGATGAGAAGTATATTAGAGACACTACATTCAATCTCTTGAGTGCAGGAAATGGAACAATTACTTCAGGTCTCATTTGGTTCTTTTGGCTTATTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATCAAAGATAATTGTTTAACACAAGACGAGAATTCGATCACTAACTCAAGTTTGAAAGAGGTTGATAAACTAGTATACCTTCATGGTGCTATATGTGAAGCTTTGAGGCTTTACCCTCCTGTACCATTTCAGCACAAGTGTGCAATCAAATCTGATGTTCTACCTAGTGGACACTATGTTAGTCCAAATACAAAGTTAATATATTCTTTGTACGCAATGGGAAGGATGGAACAAATATGGGGAGAAGATTGCATGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGACAAATTATACATGTTCCATCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTCTTGGTAAAGATATTAGCTTTGTTGAAATGAAAATGGTTGCAGCTTCTATATTATGGAAATTTCACATTCAAGTTGTTGAAGGTCATTCTGTAACTCCAAGGGTTTCTGTTGTTCTTCGCATGGGACGTGGCCTTAAGGTCAAAGTCAATAAAAGATGTGACTGA 1251 0.3437 MNVHHITSKNFSNYGKGTDFHEIFEVLGVGIFNLDSDEWKQERKMLHSLFKRKSFEIFIQENIQKKLENCLIPFLEHASKGMQVFDLQDILERFTFDITCTFLFGFDPNSLPYKFDEFSDIAYIKAISVLEDTVLSRHYIPKCIWKLKKWLQIGQEKKNMVAQENIHQFLHHCIRRNKDVDESHSSLLKEIIKKCSENGEIDEKYIRDTTFNLLSAGNGTITSGLIWFFWLISTHPIVEAKIIQEIKDNCLTQDENSITNSSLKEVDKLVYLHGAICEALRLYPPVPFQHKCAIKSDVLPSGHYVSPNTKLIYSLYAMGRMEQIWGEDCMEFKPERWISDRGQIIHVPSYKFIAFNAGPRSCLGKDISFVEMKMVAASILWKFHIQVVEGHSVTPRVSVVLRMGRGLKVKVNKRCD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01293 416 Gene3D Cytochrome P450 1 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 SUPERFAMILY Cytochrome P450 3 414 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS P450 superfamily signature 216 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS P450 superfamily signature 353 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS E-class P450 group I signature 205 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS E-class P450 group I signature 225 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS E-class P450 group I signature 273 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS E-class P450 group I signature 352 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PRINTS E-class P450 group I signature 362 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01293 416 PANTHER CYTOCHROME P450 1 409 - -
Tsu01g01293 416 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 355 364 IPR017972 GO:0005506|GO:0016705
Tsu01g01293 416 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 409 - -
Tsu01g01293 416 Pfam Cytochrome P450 7 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01293 Tsu-Chr1 12141649 12142899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01293 2 416 Cytochrome P450 AT2G23180 43.578 1.19e-130 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01293 - - cam:101494575 587.03