Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01292 ATGCTACCATCACTTTTGTATAATCAATCAAATATTCATGATTATGCAGCCTATCTTTTGAAACATCATGGAGGAACTTTTCAATTTAAAGGACCTTGGTTCACAAACATTGCGAGCTTTATCATCACCAGTGATCCCATGAATGTGCACCACATCACTAGCAAGAATTTCAGCAACTATGGGAAAGGGTCTGATTTCCATGAGATTTTTGAAGTTCTTGGTGTTGGTATTTTCAATTTAGATTCCAATGAATGGAAACAAGAAAGGACACTACTTCATTCATTGCTCAAAAGAAAAAGCTTTGAGATATTCCTTCAACAAATCATTCAAAAGAAGCTTGAGAATTGCTTATTACCATTTCTTGATCAAGCATCAACAGGAGTACAAGTACTCGACTTACAAGATATTCTTGAAAGGTTCACCTTTGATACTACATGTATTTCTTTATTCGGATTTGATCCTAATTGCCTTCCTTACAAGTTTAACGAGTTATCGGATATTGCTTATGTAAAAGCTATTTCTGTGCTTGAGGATGTGATATTGTTGAGGCACTATATTCCAAAATGTATTTGGAAGCTACAAAAATGCTTAAAAATTGGTCAAGAGCTAAAGGGCAAGCTAGCTCAAGAAAATCTTCACCAATTCGTGTACAAATGTATAAATTATTACAAAGGCGATGAAGAGAAAAGAAGATTGAGAAACAATAAAGATGTGGATGAAAGTCATTCTTGCTTGTTAAACGAATTAATGAAGGAAGGATTGGAAAAGGGCGAAAGGGTTGATAGGTATATTAGAGACACTGCAATCAATCTATTAATTGCGGGCAATGGTACAATTAGTTCTGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTTAAAGCTAAAATTATTCAAGAGATTAAAGATAATTGTTTAACAAAAGGGGAGAATTTGATCACTAATTTAAATGTAGAAGTTCTTGATAAGCTAGTTTACCTTCATGGAGCTATAAGTGAAGCCTTAAGGCTTTATCCTCCTCTAGCATTTCAACACAAATGTGCAGTCAAATACGATATACTACCTAGTGGAGACCATGTAAGTCCGAATACAAAGTTAATATACTCTTTGTACGCAATGGGAAGGATGGAACAAATATGGGGCCAAGATTGTTTGGAATTTAAGCCTGAGAGATGGATATCAGATAAAGGGCAAATTATACATGTACCATCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTTTGGGGAAAGATATTAGCTTTGTTGAAATGAAAATGGTTGCAGCTTCTATATTATGGAAGTTTCACATACATGTTGTAGAAGGTCACTCTGTAACTCCAAAGGTTTCTATTGCTCTTCGCATGGAACATGGCTTTAAGGTCAAAGTCAATAAAAGATGTGATAtagattga 1431 0.3473 MLPSLLYNQSNIHDYAAYLLKHHGGTFQFKGPWFTNIASFIITSDPMNVHHITSKNFSNYGKGSDFHEIFEVLGVGIFNLDSNEWKQERTLLHSLLKRKSFEIFLQQIIQKKLENCLLPFLDQASTGVQVLDLQDILERFTFDTTCISLFGFDPNCLPYKFNELSDIAYVKAISVLEDVILLRHYIPKCIWKLQKCLKIGQELKGKLAQENLHQFVYKCINYYKGDEEKRRLRNNKDVDESHSCLLNELMKEGLEKGERVDRYIRDTAINLLIAGNGTISSGLSWFFWLVSTHPIVKAKIIQEIKDNCLTKGENLITNLNVEVLDKLVYLHGAISEALRLYPPLAFQHKCAVKYDILPSGDHVSPNTKLIYSLYAMGRMEQIWGQDCLEFKPERWISDKGQIIHVPSYKFIAFNAGPRSCLGKDISFVEMKMVAASILWKFHIHVVEGHSVTPKVSIALRMEHGFKVKVNKRCDID 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01292 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Tsu01g01292 476 Pfam Cytochrome P450 7 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 Gene3D Cytochrome P450 1 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01292 476 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 469 - -
Tsu01g01292 476 PANTHER CYTOCHROME P450 5 469 - -
Tsu01g01292 476 SUPERFAMILY Cytochrome P450 6 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01292 Tsu-Chr1 12137392 12138822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01292 1 475 Cytochrome P450 AT2G23180 43.711 5.49e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01292 - - cam:101494575 693.345