Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01289 ATGCTACCATCACTTTTGCATAATCACTCCAATATTCATGATTATGCAACCTTACTTTTGAAACATTATGGTGGCACTTTTCATTTTAAAGGACCTCGGTTCACAAACATTGCCGACTTTACCCTCACCAGTGACCCCATGAATGTGCACCACATCACTAGCAAGAATTTCACCAACTATGGTAAGGGGTCTGATTTCCATGAGATTTTTGAAGTTTTTGGTCTTGGTATTTTCAATTTGGATACCAATGAATGGAAACAAGAGAGAGCATTGTTTCATTCATTGCTCAAAAGGAATAGTTTTAAGATATTCCTTGAACAAAACATTCAAAAAAAGCTAGCAAATTGCCTATTACCATTTTTGGATCAAGCATCCAAAAGTGAACAAATAGTTGATCTACAAGATATTCTTGAGAGGTTCACCTTTGATATTGCTTTCACTTCATTATTTGGATTTGATTCTAATTGCTTTCCTAACAATCTCAATGAGCTCGAAGATATTGCTTATGTAAAAGCTATTTCTGTTCTTGAGGATATGATATTGTTGAGGCACCTCATTCCAAATTGTATTTGGAAATTACAAAAATGGCTAAAAATTGGTCAAGAGAAGATGGGAATGGTGGCTCAAGAAAATCTTTACGAATTCTTGAACAAATGCATAGCTTATTACAAAGGCGACGAAGAGAAAAGAAGATTGAGAAGTAGTGAAGATGTGGATGAATCAAATTCTTGCTTACTAAAAGAACTAATGAAGGAAGGAATATTGGAAAAGGGAGAAATGGTTGAGAAATACATTAGAGACACTGCAATCAATCTTTTGCTTGCAGGAAACGGATCGGTAAGTTCAAGTCTCAATTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAAAAGCTAAAATTATTCAAGAGATCAAAGATAATTGTTTAACACAAGACGCGAATTTGATCACAAGTTTAAGTGTAGAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCGTTAAGGCTTTATCCTCCTATAGCATTTGAGCACAAGTGCGCAACTAAATCCGATATACTACCTAGTGGAGATCATGTTAGTCCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAGAAGATTGCATGGAATTTAAGCCTGAGAGATGGATATCAGATAGAGGACATATTAAACATGTACCGTCGTACAAGTTCATAGCATTTAATGCAGGTCCTAGAAAGTGCATAGGAAAAGATATGAGTTTTGTTCAAATGAAAATGGTTGCAATTGCAGTGTTATGGAAATTTCAGATACAAGTAGTGGAAGGACACTCTGTAACTCCAAGGGCTTCTATTGTTATTCGTATGAAACATGGATTTAAGGTCAAAGTCAGTAAGAGATAA 1422 0.3523 MLPSLLHNHSNIHDYATLLLKHYGGTFHFKGPRFTNIADFTLTSDPMNVHHITSKNFTNYGKGSDFHEIFEVFGLGIFNLDTNEWKQERALFHSLLKRNSFKIFLEQNIQKKLANCLLPFLDQASKSEQIVDLQDILERFTFDIAFTSLFGFDSNCFPNNLNELEDIAYVKAISVLEDMILLRHLIPNCIWKLQKWLKIGQEKMGMVAQENLYEFLNKCIAYYKGDEEKRRLRSSEDVDESNSCLLKELMKEGILEKGEMVEKYIRDTAINLLLAGNGSVSSSLNWFFWLVSTHPIVKAKIIQEIKDNCLTQDANLITSLSVEELDKLVYLHGAICEALRLYPPIAFEHKCATKSDILPSGDHVSPNTKLIYSLYAMGRMEQIWGEDCMEFKPERWISDRGHIKHVPSYKFIAFNAGPRKCIGKDMSFVQMKMVAIAVLWKFQIQVVEGHSVTPRASIVIRMKHGFKVKVSKR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01289 473 PRINTS E-class P450 group IV signature 379 397 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS E-class P450 group IV signature 421 439 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS E-class P450 group IV signature 266 292 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS E-class P450 group IV signature 405 421 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS E-class P450 group IV signature 328 344 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 Pfam Cytochrome P450 8 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Tsu01g01289 473 SUPERFAMILY Cytochrome P450 5 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PANTHER CYTOCHROME P450 5 468 - -
Tsu01g01289 473 Gene3D Cytochrome P450 3 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01289 473 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01289 Tsu-Chr1 12108654 12110075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01289 1 473 Cytochrome P450 AT2G23180 43.154 2.09e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01289 - - cam:101494575 677.167