Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01287 ATGCTACCATCAGTTTTGCATAATCAATCCAATATTCATGACTATGCAGCCtatgttttgaaacatcatGCAGGAACTTTTCAATTTAAAGGACCTTGGTTCACAAACATTACCAACTTTATCATCACCAGTGACCCCATGAATGTGCACCACATCACTAGCAAGAACTTCACCAACTATGGTAAGGGGTCTGATTTCCATGAGATTTTTGAAGTTCTTGGTCTTGGTATTTTCAATTTGGATTCCAATGAATGGAAACAAGAAAGGACACTACTTCATTCATCCCTCAAAAGGAATAGTTTTAAGATATTCCTTGaacaaaatcttcaaaaaaagcTAGCAAATTGCCTATTACCATTTTTGGTTCATGCATCCAAAAGTGAACAAATACTTGATCTACAAGATATTCTTGAGAGGTTCACCTTTGATATTGCTTTCACTTCTTTCTATGGATTTGATTCTAATTGCCTTCCTAACAATCTCAATGAGCTTGAAGATATTGCTTATGTAAAAGCTATTTCTGTGTTCGAGAATACGATATTCTTGAGGCACTGCCTTCCAAATTGTATTTGGAAATTACAAAAATTGCTAAAAATTGGTCAAGAGAAGAAGGGAATGGTAGCTCAAGAAAATCTTTACGAATTCTTGAACAAGTCTATAGCTCATTATAAAGGAAATGAAGAGAAAAGAAGATTGAGAAGCAATGAAGATGTGGATGGATCAAATTCTTGCTTGCTAAATGAACTAATAAAGGAAGGAATACTGGAAAAGGGGGTAATGGTTGAGAAATACATCAGAGACACTGCAATCAATATTTTGTTTGCAGGAAACGGATCAATTAGTTCAAGTCTCAATTGGCTCTTTTGGCTTCTTTCAACTCATCCTATTGTGGAAGCTAAAATTATTCAAGAGATCAAAGATAATTGTTTAACACAAGACGAGAATTTAAACACGAGTTTAAGTGTTGAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCGCTAAGGCTTTATCCTCCTATAGCATTTGAGCACAAGTGCGCAATTAAATCTGATATACTACCTAGTGGAGATCATGTTAGTCCCGCTACAAAGTTAATATATTCTTTGTATGCGATGGGAAGGATGAAACAAATATGGGGAGAAGATTGCATGGAATTTAAGCCTGAGAGATGGATATCAGATAGAGGACATATTAAACATGTACCGTCGTACAAGTTCATAGCATTTAATGCAGGTCCAAGAAAGTGTATAGGAAAAGATATGAGTTTTGTTCAAATGAAAATGGTTGCAGTTGCAGTGTTGTGGAAATTTCAGATACAAGTGGTGGAAGGTCACTCAGTAACTCCAAGGGCTTCTATTCTTATTCGTATGAAACATGGATTTAAGGTCAAAGTCAATAAGAGATGCCTTTGA 1428 0.3487 MLPSVLHNQSNIHDYAAYVLKHHAGTFQFKGPWFTNITNFIITSDPMNVHHITSKNFTNYGKGSDFHEIFEVLGLGIFNLDSNEWKQERTLLHSSLKRNSFKIFLEQNLQKKLANCLLPFLVHASKSEQILDLQDILERFTFDIAFTSFYGFDSNCLPNNLNELEDIAYVKAISVFENTIFLRHCLPNCIWKLQKLLKIGQEKKGMVAQENLYEFLNKSIAHYKGNEEKRRLRSNEDVDGSNSCLLNELIKEGILEKGVMVEKYIRDTAINILFAGNGSISSSLNWLFWLLSTHPIVEAKIIQEIKDNCLTQDENLNTSLSVEELDKLVYLHGAICEALRLYPPIAFEHKCAIKSDILPSGDHVSPATKLIYSLYAMGRMKQIWGEDCMEFKPERWISDRGHIKHVPSYKFIAFNAGPRKCIGKDMSFVQMKMVAVAVLWKFQIQVVEGHSVTPRASILIRMKHGFKVKVNKRCL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01287 475 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 470 - -
Tsu01g01287 475 PRINTS E-class P450 group IV signature 266 292 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS E-class P450 group IV signature 379 397 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS E-class P450 group IV signature 328 344 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS E-class P450 group IV signature 405 421 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS E-class P450 group IV signature 421 439 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 SUPERFAMILY Cytochrome P450 10 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Tsu01g01287 475 Gene3D Cytochrome P450 1 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 Pfam Cytochrome P450 38 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01287 475 PANTHER CYTOCHROME P450 5 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01287 Tsu-Chr1 12099998 12101425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01287 1 473 Cytochrome P450 AT2G23180 41.841 1.05e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01287 - - cam:101494575 648.662