Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01282 ATGAATGTGAACCATATCACTAGCAAGAATTTCAGCAATTATGGGAAGGGACCTGATTTCCCTGAAATTTTTGAAGTTATTGGAGCTAGTATTATAACTTTGGATTCCAATGAATGGAAACAAGAGAGGACAAAACTTCATTCATTGctcaaaaacaaaagttttgaGACATGTCTTCAACAAAATGTTCAAAAGAAGCTACAAAATTGCCTATTACCATTTCTTGATCACCATGCATCAAAAGGTGGACAAGTCCTTGATTTACAAGATATTTTTGAGAGGTTTACCTTTGATATTACTTGTACTTCTTTATTTGGATTTGATCCTAATAGCTTTCCATACAATTTCGATGAGATCGTAGAGATTGCTTATGTAAATGCTATTTCTGTGCTTGAGGATATGGTATTGTCGAGACACTATATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTACAAATTGGtcaagagaagaaaaacaagGTAGCTTTGGAAGCTCTTGACCAATTCTTGTTGAAGTGTATAATTTCATCCAAAGGCAATGAAGAGAAAAGAAGATTGAGAAGTAGTGGATATGTCGAACAAAGTGACGACTCTCTCTGCTTGCTACAAGCACTAATGAACAAAGCCAACTTAGGAAAGAAGGAAATGGTAAAAAATGAGAAGTATATTAGAGACACTGCAGTCACTCTCTTAGCTGCAGGAAATGGAACAATTAGTTCAGGTCTCAGTTGGTTCGTTTGGCTTGTTTCAACTCATCCTATTGTCGAAGCTAAAATCATTCAAGAGATCAAAGATAATTTACTAAAACTAGACGAGAATTTGATCGATAATTTAACGATGGAAAATCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCCTTGAGGCTTTACCCTCCAATACCATTTGAGCACAAGTGTGCAGTGAAATCTGATATACTACCTAGTGGAGACCATGTTAGTCCAAATTTAAAGGTACTATACTCTTTATATGCAATGGGAAGGACAAAACAAATATGGGGTGAGGATTGCTTGGAATTCAAGCCAGAGAGATGGATATCAGATAGAGGACAAATTATACATGTACCATCTTACAAGTTTATAACATTCAATGCAGGTCCAAGAAGTTGTTTAGGAAAAGATATGAGCTTTATACAAATGAAAATGGTTGCAGTTGCTGTCTTATGGAAGTTTCGTGTTCAAGTGATGAAAGGTCACTCCATTACTCCAAGAGTTTCTATGATTCTTCGTATGGAAAATGGATTTAAGGCCAATGTTATTAAAAGATGCATTTGA 1305 0.3448 MNVNHITSKNFSNYGKGPDFPEIFEVIGASIITLDSNEWKQERTKLHSLLKNKSFETCLQQNVQKKLQNCLLPFLDHHASKGGQVLDLQDIFERFTFDITCTSLFGFDPNSFPYNFDEIVEIAYVNAISVLEDMVLSRHYIPKCIWKLQKWLQIGQEKKNKVALEALDQFLLKCIISSKGNEEKRRLRSSGYVEQSDDSLCLLQALMNKANLGKKEMVKNEKYIRDTAVTLLAAGNGTISSGLSWFVWLVSTHPIVEAKIIQEIKDNLLKLDENLIDNLTMENLDKLVYLHGAICEALRLYPPIPFEHKCAVKSDILPSGDHVSPNLKVLYSLYAMGRTKQIWGEDCLEFKPERWISDRGQIIHVPSYKFITFNAGPRSCLGKDMSFIQMKMVAVAVLWKFRVQVMKGHSITPRVSMILRMENGFKANVIKRCI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01282 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 373 382 IPR017972 GO:0005506|GO:0016705
Tsu01g01282 434 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS E-class P450 group I signature 370 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS E-class P450 group I signature 380 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS E-class P450 group I signature 291 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 Pfam Cytochrome P450 8 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 Gene3D Cytochrome P450 1 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 429 - -
Tsu01g01282 434 PANTHER CYTOCHROME P450 1 429 - -
Tsu01g01282 434 SUPERFAMILY Cytochrome P450 3 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS P450 superfamily signature 292 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01282 434 PRINTS P450 superfamily signature 371 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01282 Tsu-Chr1 12065506 12066810 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01282 2 432 Cytochrome P450 AT2G23180 42.202 2.90e-123 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01282 - - cam:101494575 578.941