Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01279 ATGGGAAGGATGGAACAAACATGGGGAGTGGATTGCTTGGAATTTAAGCCTGAGAGATGGATATCTGATCGAGGGGAGATTAAACATGTACCGTCTTACAAGTTCATAGCATTCAATGCAGGTCCTAGAAAGTGTGTAGGGAAAGATATCAGCTTTgttcaaatcaaaatgattGCAGTTGCTATGTTATGGAAGTTTCAAATACAGGTTGTGGAAGGTCACTCTGTTATTCCAAGGGTTGCTGTGGGTCTTAGCATGAAACATGGCCTTAAAGTCAAAGTTAATAAAAGGAGCATTTGA 300 0.3867 MGRMEQTWGVDCLEFKPERWISDRGEIKHVPSYKFIAFNAGPRKCVGKDISFVQIKMIAVAMLWKFQIQVVEGHSVIPRVAVGLSMKHGLKVKVNKRSI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01279 99 Gene3D Cytochrome P450 1 99 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01279 99 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 38 47 IPR017972 GO:0005506|GO:0016705
Tsu01g01279 99 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 95 - -
Tsu01g01279 99 Pfam Cytochrome P450 2 81 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01279 99 SUPERFAMILY Cytochrome P450 1 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01279 99 PANTHER CYTOCHROME P450 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01279 Tsu-Chr1 11994267 11994566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01279 1 98 Cytochrome P450 AT2G23180 55.102 1.18e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01279 - - mtr:MTR_1g035760 153.68