Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01276 ATGTCCTTGTTTCattatatttcattatttgtGGCCATTCTCTTCATCATATCCTATAATATAtggagaaacaaaaaaaatgaacttataCCAAATTGGCCAATAATTGGCATGCTTCCATCAGTTTTGCATAATCAATCCAATATTCATGATTATGCAACCTTACTTTTGAAACATTATGGTGGCACTTTTCACTTTAAAGGACCTTGGTTCACAAACATTGCCAGCTTTATCATCACCAGTAATCCCATGAATGTGAACCACAGTCTCAGCAAGAATTTCAACAATTATGGGAAAGGAACTGATTTCCATgagatttttgaaatttttggtgTTGGTATTTTCAATTTGGATTCCGATGAATGGAAACAAGAAAGGGCACTCCTTCATTCAATTCTCAAAATGAAAAAGTTTGAGATATCCGCTCAACAAAACATTCGAAAGAAGTTAGAGAATTGCCTATTACCATTTCTTGATCATCATGCATCAGAAGGCATACTCGATTTACAAGATATTCTTGAGAAGTTAACCTTTGATATTAGTTgtacttttttatttggatttgatcCAAATTGCCTTTCTTACAAGTTCAATGAGTTATCAGATATGGTATTGTCGAATTACGATATTCCAAAAGCTCTTACCTTGCTTGAGGATATGGTATTGTCGAGACACTATATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGCTAAGAAGAACAAAGTAGCCGAAGAACATCTACATCAATTCATATACAACTCCATATCTTATTACAAAGGTGATGAAGATGGGGATGAATCTTCTTACTTGCTAAAAGAAATAATGAAGGAAGGGTTGGGAAATGGTGAAAAGGCTGAGGAGTATATTAGAGACACAACACTCAATCTCTTGGGCGCCGGAAGTGGAACAGTTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATTATTCaagagataaaaaataattgtttaacACAAGAGGAGAATTTTGTCACAAATTTAAGTGTGGAAATGCTTGAAAAGCTAGTTTACCTTCATGGAGCTATAAGTGAAGCCTTAAGGCTTTATCCCCCTCTAGCATTTCAACACAAATGTGCAATCAAAGATGATACACTACCTAGTGGAGACCATGTAAGTCCAAATACAAAGTTAATATTTTCAATGTATGCAATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGATATCAGATAGAGGACATATTATAAAAGTACCATCTTACAAGTTCATCGCATTCAATGCAGGTCCTAGAAGTTGTATCGGTAAAGATATTAGCTTTATTCAAATGAAAATGGTTGCAGCTTCGGTGTTGTGGAAATTTCACATACATGTGGTGGAAGGTCACCATGTAACTCCAAGGGCTTCTATTGCCCTACGCATGAAACATGGCTTGAAGGTCAAAGTTAGTAAAAGATGCATTTGA 1518 0.3379 MSLFHYISLFVAILFIISYNIWRNKKNELIPNWPIIGMLPSVLHNQSNIHDYATLLLKHYGGTFHFKGPWFTNIASFIITSNPMNVNHSLSKNFNNYGKGTDFHEIFEIFGVGIFNLDSDEWKQERALLHSILKMKKFEISAQQNIRKKLENCLLPFLDHHASEGILDLQDILEKLTFDISCTFLFGFDPNCLSYKFNELSDMVLSNYDIPKALTLLEDMVLSRHYIPKCIWKLQKWLQIGQAKKNKVAEEHLHQFIYNSISYYKGDEDGDESSYLLKEIMKEGLGNGEKAEEYIRDTTLNLLGAGSGTVSSGLSWFFWLVSTHPIVEAKIIQEIKNNCLTQEENFVTNLSVEMLEKLVYLHGAISEALRLYPPLAFQHKCAIKDDTLPSGDHVSPNTKLIFSMYAMGRMEQIWGEDCMEFKPERWISDRGHIIKVPSYKFIAFNAGPRSCIGKDISFIQMKMVAASVLWKFHIHVVEGHHVTPRASIALRMKHGLKVKVSKRCI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01276 505 Pfam Cytochrome P450 31 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 Gene3D Cytochrome P450 13 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 500 - -
Tsu01g01276 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01276 505 PANTHER CYTOCHROME P450 11 500 - -
Tsu01g01276 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Tsu01g01276 505 SUPERFAMILY Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01276 Tsu-Chr1 11936122 11937896 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01276 1 503 Cytochrome P450 AT2G23180 39.197 1.78e-131 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01276 - - cam:101494575 688.337