Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01245 ATGCACAACGTTCTTGGAGTTCACCATAACGTGAATATTGTTAACTCTTTGGAGGATAATTCAGACTTAACTGTTCATTGCAAATCTAGAGATGATGACCTTGGAGTTCATGTTCTTCATCATCGAGATAAGTTTGGTTTTGCATTTAAGGATAATATTTGGGGCACCACACTATTCTTCTGTTCCTTCCAATGGAGTAATGAGTTTCAATGGTTTGATATATACATATTCGATAGAGATTATAATAGATGTCATGATTGCAACTGGTCTATAAAGATAGCAGGACCATGTCTGAATCTAAGCGATGGTTGTTGGGGTTTGGGGATAATTTTGCGGTTGAAGGATGGCGGTTGTGTTGGAGCTACGACCGAGATGGTGCAAGGATTCGACGCGGCTGTTAACGCGGAAGTTATAAGTTCGAATTCCAACTCCTGCCATCTGtga 444 0.4009 MHNVLGVHHNVNIVNSLEDNSDLTVHCKSRDDDLGVHVLHHRDKFGFAFKDNIWGTTLFFCSFQWSNEFQWFDIYIFDRDYNRCHDCNWSIKIAGPCLNLSDGCWGLGIILRLKDGGCVGATTEMVQGFDAAVNAEVISSNSNSCHL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01245 147 PANTHER - 7 99 IPR010264 -
Tsu01g01245 147 Pfam Plant self-incompatibility protein S1 10 100 IPR010264 -
Tsu01g01245 147 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 7 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01245 Tsu-Chr1 11517631 11519830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01245 11 97 Carbohydrate Esterase AT3G16970 41.758 4.87e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01245 - - rcu:125370465 122.864