Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01243 ATGGATTCTCCAACTTTTTACTTACTTGCCCTTATctcttttttcctcttcatCCTTGTGGCACTTAGGAAGACTCTCAAGAAAAAAGGGTCACCTCCAAACCTACCACCAGGACCATGGAAGTTACCTATTATAGGACACATACATCATCTAATTACATCTACACCACATCAAAGATTAAGAGACTTGGCCAAAATACATGGACCCTTGATGCATCTACAACTTGGAGAAATCTCTACAATTGTTGTTTCATCACCAGATTATGCTAAAGAGGTACTTAAAACACATGATGTCATATTTGCATCTAGGCCTAAAATTGTTGCAGTAGACATACTATTATATGGATCCACAGATATTGCTTTTTCACCTTATGGAAATTATTGGAGACAACTAAGAAAAATATGCACAATTGAACTTCTTACTCAAAAACGTGTCAATTCATTCCAACCTATAAGAGAAGAAGAACTCACCAATCTCATCAAAAGGATTGATTCACAGCAAGGGTCACCTATCAACATTACTCAAGCTATACTTGAAACAATAATGAATATTACTACAAGGTCTGCATTTGGAAACAAATGTAAAGGCACAGAACAACTTGTATCATTGGCAAAGGGAGAATCAGTTGCTGGAGGTTTCGACATAGCGGAATTGTTTCCTTCTGTTAAATGGCTTCCACTTGTTTCTGGTTTGAGGCCTAAACTTGAAAGGTTGCATAGACAAATTGATCAAATACTAGAAGACATCATCATTGAGCATAAAGAAGCaaagtcaaaagaaaaagaaggtcAAGTTGAAGCAGAAGAAGATCTAGTTGATGTTCTTCTAAAATTTCAAAGTGGTAATGATAATGATCAAGATATATGTTTAACTGACAACAATATCAAGGCTATAATCTTGAACATCATTGGTGCCGGAGGAGAAACAACATCTACTACCATAATTTGGGCAATGGCAGAGTTGGTAAGGGATCCAAGAGTGATGAAGAAAGCACAATATGAGGTGAGAGAAGTATTCAACAAGAAAGGAATTGTTAGTGAAAACAATATAAATGAACTAAAATATTTGAAGTTAGTTGTGAAAGAGACTCTAAGGTTACACCCTCCAAGTCCTCTTTTACTTCCAAGAGAATGTGGACAAGCATGTGAGATTAATGGGTATCATATACCGGCCAAAAGTAAGGTGATGGTGAATGTATGGGCGATTGGAAGAGATCCAAAGTATTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCGTTGATAGTTCTATTGACTTCAAAGGGACTAATTTGGAGTACATTCCTTTTGGTTCCGGAAGAAGAATATGTCCAGGTATTACATTTGGTTTGATAAATGTTGAGGTGACACTTGCATTCTTGTTATATCACTTTGATTGGAAGCTTCCCAATGAAATGAAAGGCGAGGATTTGGACATGGCTGAACAATTTGGAGCtaatgttaaaagaaaaaatgacttGTACTTGATACCCAATGCTCCTCTTCCTTCTAGGGTATAA 1521 0.355 MDSPTFYLLALISFFLFILVALRKTLKKKGSPPNLPPGPWKLPIIGHIHHLITSTPHQRLRDLAKIHGPLMHLQLGEISTIVVSSPDYAKEVLKTHDVIFASRPKIVAVDILLYGSTDIAFSPYGNYWRQLRKICTIELLTQKRVNSFQPIREEELTNLIKRIDSQQGSPINITQAILETIMNITTRSAFGNKCKGTEQLVSLAKGESVAGGFDIAELFPSVKWLPLVSGLRPKLERLHRQIDQILEDIIIEHKEAKSKEKEGQVEAEEDLVDVLLKFQSGNDNDQDICLTDNNIKAIILNIIGAGGETTSTTIIWAMAELVRDPRVMKKAQYEVREVFNKKGIVSENNINELKYLKLVVKETLRLHPPSPLLLPRECGQACEINGYHIPAKSKVMVNVWAIGRDPKYWTEPERFYPERFVDSSIDFKGTNLEYIPFGSGRRICPGITFGLINVEVTLAFLLYHFDWKLPNEMKGEDLDMAEQFGANVKRKNDLYLIPNAPLPSRV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01243 506 Gene3D Cytochrome P450 28 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PANTHER CYTOCHROME P450 71B11-RELATED 10 499 - -
Tsu01g01243 506 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 Coils Coil 251 271 - -
Tsu01g01243 506 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01243 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Tsu01g01243 506 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01243 Tsu-Chr1 11504695 11507017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01243 7 498 Cytochrome P450 AT3G26310 43.701 9.81e-140 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01243 - - gmx:100801936 730.709