Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01239 ATGGGGAAAAAAGAAGAATCAAATCCATTTGGCAGACCTTACAATTTTTCGGTGCCTCAAGATCAAACTCCAAATAACCCTATGCTGCTACCACATTGGTCAGCAAGTATGCAGTCTTATTACAATCCCGGGTCTACTCCGACTCCCTATTATAATGCATTTCCAGCTGGTCCTTACTTGTATCATCAGTACATGTGGCCAAATCAGGCAAACAATGCACTACTTCATGATGCTTTACATGATCCTGCGAGGCTCTCCAATAAACCTCACGTAGCTGAGGATGCTGCACTGGCCTTTTCAGAAGTGGTACATAGGAATTTTGGCGAACGAAACCCAAACTTCAACAAATTATTTTCTAGAAACTTACAACCTTTAAGTTTAATAAGTGGGGTATCAAGAGAATGTGAAAACCAATCTTCAACACCAAAAAATGAGAGGGATGGAGCCTCAACGAGTGCAGCAAGTGGAAGCAAGAAATCATCAGATGAAAACCAAGATGACACTAGCAAAGATTTTCCTTTAAGTAAGAAGCAGAAATCTGACTTGATTACTGGGGATGaaAATCCATCTGGTCTGACTCAGAATTTGGAGACAGTCGTCAAGGAATCTGATGCTGATGCTGACGCTCAACTAAAATATACGGAAGATGATGatataagaaaagaaagaaaaagacaGTCAAACAGGGAATCAGCCAAGAGATCAAGGATAAGGAAACAGCAAGAATGTGAAGAGCTATGTAAAAGGATAGAAACTCTTAAGGAAGAAAACTCCGTCCTAACACAAAGGCTCGTTAGTCTTTCTGAGGAATGTCTAGAGCTCAGCAATGAAAATGATTCCATTCAGGAAGAGCTAATTAAGAAGTATGGACGCGAATCAATTGAAGATCTATTGGTCCTCATGAAGCCTACTTGA 915 0.3956 MGKKEESNPFGRPYNFSVPQDQTPNNPMLLPHWSASMQSYYNPGSTPTPYYNAFPAGPYLYHQYMWPNQANNALLHDALHDPARLSNKPHVAEDAALAFSEVVHRNFGERNPNFNKLFSRNLQPLSLISGVSRECENQSSTPKNERDGASTSAASGSKKSSDENQDDTSKDFPLSKKQKSDLITGDENPSGLTQNLETVVKESDADADAQLKYTEDDDIRKERKRQSNRESAKRSRIRKQQECEELCKRIETLKEENSVLTQRLVSLSEECLELSNENDSIQEELIKKYGRESIEDLLVLMKPT 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01239 304 MobiDBLite consensus disorder prediction 133 238 - -
Tsu01g01239 304 MobiDBLite consensus disorder prediction 1 25 - -
Tsu01g01239 304 CDD bZIP_plant_GBF1 221 271 IPR045314 GO:0003700|GO:0006355
Tsu01g01239 304 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Tsu01g01239 304 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 281 IPR004827 GO:0003700|GO:0006355
Tsu01g01239 304 Coils Coil 236 284 - -
Tsu01g01239 304 Pfam bZIP transcription factor 218 278 IPR004827 GO:0003700|GO:0006355
Tsu01g01239 304 Gene3D - 209 281 - -
Tsu01g01239 304 MobiDBLite consensus disorder prediction 201 238 - -
Tsu01g01239 304 SUPERFAMILY Leucine zipper domain 219 275 IPR046347 GO:0003700|GO:0006355
Tsu01g01239 304 MobiDBLite consensus disorder prediction 184 200 - -
Tsu01g01239 304 PANTHER BZIP TRANSCRIPTION FACTOR 3 304 - -
Tsu01g01239 304 MobiDBLite consensus disorder prediction 133 159 - -
Tsu01g01239 304 SMART brlzneu 216 280 IPR004827 GO:0003700|GO:0006355
Tsu01g01239 304 PANTHER G-BOX-BINDING FACTOR 3-RELATED 3 304 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tsu01g01239 304 MobiDBLite consensus disorder prediction 160 183 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01239 1 297 bZIP Transcription Factor Family AT4G36730 28.571 2.17e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu01g01239 bZIP_1 6.6e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01239 K09060 - gmx:102665715 291.967