Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01230 ATGGCATCTTTAGAACCCTCTACCACCACCAACAACCAGCAAAACCTCCCACTAAAACAAATCCCAGGCACCTATGGCCTCCCCTTCTTCGGACCGATATCCGACCGCCACGACTACTTCTACAACCAAGGTAGAGACAAATTTTTCTCAACAAGAATCGaaaaatacaattcaacaatCTTTAGAACAAACATGCCACCAGGCCCTTTCATTTCCTCAAACCCAAGAGTCATAGCACTCTTAGACGCCGCATCGTTCCCGATCCTTTTTGAcaacaaaaaagttgaaaaatataatGTCCTCGACGGTACATTCATGCCGTCGACAAAATTCACCGGCGGCTACCGTGTTTGTGCTTACTTAGACACAACTGAACCAAACCATGCACTTATCAAAGGTTTCTATCTTAATACTCTTTTGTCTAAAAAAGACACTTTTGTCCCTCTATTTAGAACTATACTTTCTGATGTTTTTAGTGTGATTGAAGATGAGCTTCATAGTAAAAATGGTAAAGCAAATTTTAACTCGGTTGTTAGTGATGCTTCATTTAACTTCATGTTTCGTCTCTTTTGTGATAATAAAGATCCTTCTGAAACTATCCTTGGTTCTCAAGGTCCTAAAATGTTTGATATGTGGCTACTATTTCAACTTGCTCCACTTGCAACTTTAGGGCCCCCTAAGATTTTTAATTATCTTGAAGATCTCTTGCTTCGTACTTTTCCATTTCCAGCTTGTTTGGCAAGGTCTTATTACAAGAAGCTCTACGAAGTATTTTCTTCATCAGCCGTAACACTTTTAAACGAAGCAGAAAAAGCCGGTTTAAAAAGAAGCGAAGCCTGCCACAATATCGTTTTCACAGCCGGCTTCAATGCCTACGgcggattaaagaatcaatTCCCAATTCTCTTCAAATGGGTTGGTCTAAGCGGCCCTTCGCTACACAAAGAACTCGCAAACGAGATAAGAACCATCGTAAAACAAGAAGGCGGAGTAACAATTCAGTCATTGGAAAAAATGCCGTTAGTAAAATCCGTTGTTTATGAAGCAATGCGAATAGAACCTGCCGTGCCTTATCAATATGCAAAAGCAAGAGAAGATTTGATTGTGAAGAGTCATGATGCaagttttgaaataaaaaagggTGAGATGATATTTGGATATCAACCTTTCGCTACTAAGGATCCTAGGGTTTTCGATGATGCCGAGGTTTTCGTTCCAAAAAGGTTTATCGGAGAAGGTGAGAAGTTGTTGAAGTATGTTTTATGGTCTAATGGGAAAGAAATAGAAGAACCTTCTATAGAAAATAAACAATGTCCTGGGAAAAATCTTGTTGTGCTTTTGTGTAGATTGTTCTTGGTGGAGTTTTTCTTGCATTACGATACTTTTGGTTTTGAGTCTAAAAATAATGCTTTTGGTGCTGCGGTTACTATTACTTCACTCACTAAGGCTTCTAcggtttga 1461 0.3751 MASLEPSTTTNNQQNLPLKQIPGTYGLPFFGPISDRHDYFYNQGRDKFFSTRIEKYNSTIFRTNMPPGPFISSNPRVIALLDAASFPILFDNKKVEKYNVLDGTFMPSTKFTGGYRVCAYLDTTEPNHALIKGFYLNTLLSKKDTFVPLFRTILSDVFSVIEDELHSKNGKANFNSVVSDASFNFMFRLFCDNKDPSETILGSQGPKMFDMWLLFQLAPLATLGPPKIFNYLEDLLLRTFPFPACLARSYYKKLYEVFSSSAVTLLNEAEKAGLKRSEACHNIVFTAGFNAYGGLKNQFPILFKWVGLSGPSLHKELANEIRTIVKQEGGVTIQSLEKMPLVKSVVYEAMRIEPAVPYQYAKAREDLIVKSHDASFEIKKGEMIFGYQPFATKDPRVFDDAEVFVPKRFIGEGEKLLKYVLWSNGKEIEEPSIENKQCPGKNLVVLLCRLFLVEFFLHYDTFGFESKNNAFGAAVTITSLTKASTV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01230 486 SUPERFAMILY Cytochrome P450 16 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01230 486 Gene3D Cytochrome P450 12 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01230 486 PRINTS E-class P450 group IV signature 438 456 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01230 486 PRINTS E-class P450 group IV signature 376 390 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01230 486 PRINTS E-class P450 group IV signature 392 410 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01230 486 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01230 486 PANTHER CYTOCHROME P450 26 10 484 - -
Tsu01g01230 486 Pfam Cytochrome P450 311 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01230 486 PANTHER FATTY ACID HYDROPEROXIDE LYASE 10 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01230 Tsu-Chr1 11373729 11376544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01230 8 484 Cytochrome P450 AT5G42650 48.852 1.43e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01230 K01723 - gmx:100801764 760.755