Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01214 ATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTCAGCGAGGATGAGGCACGGTTTTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGTCATCGTGACTTGAAGTTGGAGAACACATTGTTGGATGGTAGTCCGGCTCCTCGTTTGAAGATTTGTGATTTTGGTTATTCAAAGTCCTCGGTGCTACATTCGCAACCAAAATCTACAGTCGGCACCCCTGCATATATCGCTCCTGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGCGGGGTGACCTTATATGTCATGTTGGTCGGTGCATATCCTTTTGAGGATCCACAGGAGCCTAAAAATTTCCGGAAGACTATTCATAGGATTTTGAAAGTCCAATACGCAATTCCTGATTATGTTCAAATATCTCCTGAGTGCCGTCATCTGATCTCAAGGATCTTCGTTGCAGACCCTGCACAGAGAATAAGTATGCCTGAGATTCGAAACCACGAGTGGTTTTTGAGGAACCTTCCAGCCGATCTCATAGTTGGGAATACAACGAATGACCAGTTTCAGGAGCCTGAACAACCAATGCAGACAGTTGAAGAAATCATGCAGATAATTAGTGAGGCTACAATTCCTGCAGCTGGAACTCATCAGTCTCTCACTCAGTATCTTACCGGTAGCTTGGACATCGATGATGAAATGGACGAGGATATAGACACTGATCCTGACCTTGATATCGATAGCAGTGGTGAAATAGTTTATGCAATGTAA 810 0.437 MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPQEPKNFRKTIHRILKVQYAIPDYVQISPECRHLISRIFVADPAQRISMPEIRNHEWFLRNLPADLIVGNTTNDQFQEPEQPMQTVEEIMQIISEATIPAAGTHQSLTQYLTGSLDIDDEMDEDIDTDPDLDIDSSGEIVYAM 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01214 269 SUPERFAMILY Protein kinase-like (PK-like) 1 219 IPR011009 -
Tsu01g01214 269 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 1 264 - -
Tsu01g01214 269 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01214 269 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01214 269 Gene3D Transferase(Phosphotransferase) domain 1 1 247 - -
Tsu01g01214 269 PANTHER SERINE/THREONINE KINASE 1 264 - -
Tsu01g01214 269 Pfam Protein kinase domain 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01214 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01214 Tsu-Chr1 11218504 11220995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01214 1 214 CBL-interacting serine-threonine protein kinases AT5G25110 43.891 2.44e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tsu01g01214 Pkinase 5.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01214 K14498 - gmx:100804702 490.73