Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01192 ATGACATTTGGGAGGCCAGGGTATTATCCTGTTATTTTGATTGAGAAGCCGTTGAAGTTTTATGAGAGAGTTGGTTACTATGTTGTTGCCGAGTGTTGTTTAGTCACTGCAGTAAGAGATGGAATGAATCTCATACCGTATGAGTATATAGTCGGTCGTCAAGGAAACGAAACATTGCATAAAGTTATAGGCTCCTCCGGTAAGAAAAAAAGCATGTTAGTTGTGTCTGAATTCATAGGCTGTTCTCCGTCTTTAAGTGGAGCAATAAGAGTGAACCCGTGGAATATCGATGCTGTGGCAGATGCGATGGATTCTGCGTTAGGAATGGCTGATTCAGAAAAAGAGCTTCGGCATGAAAAGCATTATAGATATGTTAGTATTCATGATGTCGGATATTGGGCTTGGAGCTTTTTTCAAGATTTGGAAAGGGCTTGTTGTGATCATGGTGTGAGCAAGGGATTAGTGGCGAAACGCCTACTTTCATCTATGGAAGAAAAGGGAATGTCACctgattttgttttgtgtatAGGAGATGACAGATCTGATGAAGATATGTTTGAGGTTATCACGAGTTGGATGAACGGTCCAATAGCACCGAAAGCTGAAGTATTTGCTTGCACCGTTTGTCGGAAACCCAGTAAGGCTAAGTACTATCTTGATGATACTGCTGAAATAGTGAGATTGATTCAAGGTTTAGCATGTGtttcagataaaaaaaaaaagtttatgctAAGCTCAGGAAATTTGTTGGTGAATGTTGTTATGGTTGTTTTTCTATGTCATTGA 786 0.383 MTFGRPGYYPVILIEKPLKFYERVGYYVVAECCLVTAVRDGMNLIPYEYIVGRQGNETLHKVIGSSGKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALGMADSEKELRHEKHYRYVSIHDVGYWAWSFFQDLERACCDHGVSKGLVAKRLLSSMEEKGMSPDFVLCIGDDRSDEDMFEVITSWMNGPIAPKAEVFACTVCRKPSKAKYYLDDTAEIVRLIQGLACVSDKKKKFMLSSGNLLVNVVMVVFLCH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01192 261 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 145 - -
Tsu01g01192 261 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 2 148 IPR001830 GO:0003824|GO:0005992
Tsu01g01192 261 Pfam Glycosyltransferase family 20 2 142 IPR001830 GO:0003824|GO:0005992
Tsu01g01192 261 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 148 239 IPR001830 GO:0003824|GO:0005992
Tsu01g01192 261 Pfam Trehalose-phosphatase 148 222 IPR003337 GO:0003824|GO:0005992
Tsu01g01192 261 Gene3D Glycogen Phosphorylase B; 1 122 - -
Tsu01g01192 261 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 2 148 - -
Tsu01g01192 261 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 148 239 - -
Tsu01g01192 261 SUPERFAMILY HAD-like 119 233 IPR036412 -
Tsu01g01192 261 Gene3D - 123 245 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01192 Tsu-Chr1 11015781 11016964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01192 148 238 Trehalose Biosynthesis Gene Families AT1G68020 72.826 3.04e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01192 K16055 - gmx:100812116 266.544