Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01179 atgtcAACAACCATGGAGCTTCCAGATTGTTACTATCCCATACCACCAATTAACATCACCCCATGTATACCAACACCAAATCACACTCTCCATCTCAATAATCTTGATGATGAATTGTACAAGAAATTTATACCTTATGTGTATATATTCAAGAAATCTATAGGAATGGATACCTTGAAGTCTTCTCTATCAAGAGTTTTAGTGGATTACTACCCTTTTGCTGGTAGGTTTAGGACAAGCACTGAGGATGAGAAGAAGTTGGTGGTGGATTGTAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTCAATGGATATCACTGTTGAAGAATTACTCAAATCTTCTATGATGCCAAATAGTTCATGGAAAAAGATCATTTGTAATATAGAATCTAAAAATGCTGTAGATACTCCTCTTCTTATAATCCAGgtGACTAATCTTCGATGTGGAGGAATGATCTTGTGCGCATCAATCAACCATAGTGTGAGTGATGGCACCGGCGCATCACAATTTCTAAATGCTTGGGGTCAACTAACCCAAAAGCCCAATAGTAATTTGACATTTATACCCTCGCATGATCGACAAGTATTGAATATTCAAGAACCCCGACAAGTAAATTTTATTCACCCAATATACATCACAGAACCAACACACCCAAATCCCGAACCAAGCCTTACGATGTGGTTTCTAACACAATCGCTTGTCCCTACATCATTCATATTCAGATCCAATGAAATTCTTCGCTTAAAGAAACAATGTATGACATCATCGTTCAATCACGTAACAAGCTTTGAAGCAATAACAGCGCACTTATGGCGCTCATTAGTAAAAGCAACTAACTTGTCCCTCTCTCGAACTGTGAAGCTTTGTTTCACTGTTAACTTTCGAAAGAAGATGAAACTTCTTCCAGAAGGGTATTATGGGAATGGATTTGTTCTCGCCGGTGTTGAGAGTATGGTGAAGGATTTAGTAGCTGCAAATAACCTAGATCATGGTGTGAAACTTGTGCAAAAAGCCAAAGCTAGTGTGAATGAAGAGTATATTAAGTCAACAATTGATGTGTTGAAGGACAAAAAGGTAATTCATGATGGTTCTATAAGCTTATATGTAACACAATGGAATAGATTAGGGTTGGAAGATGTTGATTTTGGAGAAGGGAAGCCTTTGCATGTAGGTCCTTTAACTGTTCAAATTTATTGTGTTCTTTTGCCGGTTATTGGTGATTCTAATGCGGTTAGAGTGCTTTTATCAGTTCCAAAGGATATAGTGGAAAAGTTTCAACATTACATGATAGAGATAGAGAGTTGGGGAAAAGATGAATAA 1320 0.3727 MSTTMELPDCYYPIPPINITPCIPTPNHTLHLNNLDDELYKKFIPYVYIFKKSIGMDTLKSSLSRVLVDYYPFAGRFRTSTEDEKKLVVDCNGEGALFVEASMDITVEELLKSSMMPNSSWKKIICNIESKNAVDTPLLIIQVTNLRCGGMILCASINHSVSDGTGASQFLNAWGQLTQKPNSNLTFIPSHDRQVLNIQEPRQVNFIHPIYITEPTHPNPEPSLTMWFLTQSLVPTSFIFRSNEILRLKKQCMTSSFNHVTSFEAITAHLWRSLVKATNLSLSRTVKLCFTVNFRKKMKLLPEGYYGNGFVLAGVESMVKDLVAANNLDHGVKLVQKAKASVNEEYIKSTIDVLKDKKVIHDGSISLYVTQWNRLGLEDVDFGEGKPLHVGPLTVQIYCVLLPVIGDSNAVRVLLSVPKDIVEKFQHYMIEIESWGKDE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01179 439 Pfam Transferase family 19 429 - -
Tsu01g01179 439 Gene3D - 230 432 IPR023213 -
Tsu01g01179 439 PANTHER BNAC03G58010D PROTEIN 15 431 - -
Tsu01g01179 439 Gene3D - 15 213 IPR023213 -
Tsu01g01179 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01179 Tsu-Chr1 10925677 10927306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01179 19 432 Monolignol Biosynthesis Gene Families AT5G48930 26.037 8.59e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01179 - - gmx:100797134 481.1