Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01165 ATGCagcaaaacaacaacaatccaTTCCCAATCTCACTTCACAACACACATGTCAAGCTTCTCGCTTTCGATTTCCTAACCCTAACACCACCATCTTCTCCAGACTACCCTTTCACCCGCAAATCAATCCCAATCACACGTGCCGAAACCCTAGGAACAATCGTCCTCCGTGATCACAAACCTTCTAAATTCCTCCGTTTTGCAATCGACGACGGAACCGGCTGCATTCCTTGTATTCTCTGGCTTAATCACATGACTTCTCCTCATCTAGCTCGACGTCGTAGTCCGCAAGATGTTTGTCTTCTTGCTGATGCTGCTGCTAGATCTGCTGCAATGGTGAAGGTTGGTGTTGTTGCTAGGGTTAGAGGGAAAGTTACTGGGTTTAAGGGTGGGGTTCAGATTACTGTTAGTGATGTTTTTGTTGAGAGGGATCCTAATGTTGAGATTTTGCATTGGGTTGAGTGTGTTAATTTGGCTAAGAATTGTTATAATCTTGTTAAtgctccttcttcttcttctggttCTGGTTCTGCAACTCGAAAATAG 546 0.4103 MQQNNNNPFPISLHNTHVKLLAFDFLTLTPPSSPDYPFTRKSIPITRAETLGTIVLRDHKPSKFLRFAIDDGTGCIPCILWLNHMTSPHLARRRSPQDVCLLADAAARSAAMVKVGVVARVRGKVTGFKGGVQITVSDVFVERDPNVEILHWVECVNLAKNCYNLVNAPSSSSGSGSATRK 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01165 181 Gene3D - 12 166 IPR012340 -
Tsu01g01165 181 PANTHER REPLICATION PROTEIN A-RELATED 12 166 IPR040260 -
Tsu01g01165 181 Pfam OB-fold nucleic acid binding domain 55 139 IPR004365 GO:0003676
Tsu01g01165 181 PANTHER CST COMPLEX SUBUNIT STN1 12 166 - -
Tsu01g01165 181 SUPERFAMILY Nucleic acid-binding proteins 35 157 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01165 43 158 Core DNA Replication Machinery Family AT2G24490 25.862 4.37e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01165 K23312 - csin:114287844 204.912