Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01160 ATGGACTTACACATACAATATTGGGTTTGGATATTTGCTACTTTGTTAGCATGCTATTtttgtatgaacaattttgtgTGGAAATTGAATGAGTGGTATTATAATATGAAACTAAGAAAGAAACAATACCCTCTTCCTCCTGGTCATTTGGGATGGCCTCTTATTGGCAATATGTTGGATTTTGTTAAAGATTTCAAATCTGGTCATCCTGATTCATTCATCAATAACCTTATTTCCAGATATGGACGAACGGGTATCTACAAGTCACACTTGTTCGGGAGTCCAAGCATCATCATTAGTGATGCAGATATGTGTAGGCGAGTGCTAACAAATGACGAGACTTTTAAAATCGGTTATCCAAAATCCACTCTAGAAGTGATTAGATGTAAATGCTTTTGGAGTTCATCTAGAGAAGAGCACAAACAGTATAAACGACTAATCTCGGTTCTTACCATGGGTCACAATACATTAGAAATGTACCTACCTCGCATGGAGGACATTGTGATTAATTCTTTGGAGGAACTTTCTAGTATGAGTCACCCGGTTGATTTTTTGAAAGAGATGAAAAATATTTCCTTTAATATAATCATTGAAATTTTCATGGGCTCTTACAATCAACACATCATTACCAAAATAGGGAATTCTTTTACTGAAATTTATGGTGCTTTGTTCTCTATGCCCATTAACTTTCCTGGTTTTGCTTTTCATAAAGGACTCCTGGCACGTGAGAAGTTGGCCAAATTAATTCAACCTATAGTAGAAGAAAGGAGGTTGATGAAAAAGAATGGTGACAAAAAAGATTTACTTGATATTCTTTTGGAGTTGAACTTTGAAGATGGTTGGAAACCAGAGGATGAGGACATTGTTGACATGATGATAGGGTTTGTACTTGCTGGTCATGAAGCCACAGCAAATGGTATGATGTGGTCAATTATATATCTTACACAAAATCCACATATCTTAAAAAAAGCAAAGGAAGAGCAGGAGGAAATTATAAAGACAAGACTGCCCACACAAAAACAATTAAGTCTTAAGGAGATTAAGCAAATGGTTTATCTTTCTCatATAATCAACGAAATGTTACGAATTGTCTCTATTAACTTTGCAAATTTTAGGGAGGCAACTAGAGATGTTAATATCAATGGTTATATAATACCAAAAGGGTGGAAAGTTCTCACCTGGGCAAGAGCTGTTCATATGGATCCCACGTATTATTCAAATCCGGATGAATTTAATCCATCTAGATGGAATGATCACAATGCCAAACTTGGGACCTTCCTTCCTTTTGGAGCTGGAAGTATGCACTGTCCTGGGAGTGACTTggcaaaaattgaaatttccaTATTTCTacattattttcttctcaattaCAAGCTGGAGCGAGTAAATCCAGAATGTCCTATTACATGTTTACCATCATCCAAGCCCAAAGACAATTGCCTTGCTAAGGTCATAAAGGTCTCAAGTGTTGCTGCATAG 1479 0.3516 MDLHIQYWVWIFATLLACYFCMNNFVWKLNEWYYNMKLRKKQYPLPPGHLGWPLIGNMLDFVKDFKSGHPDSFINNLISRYGRTGIYKSHLFGSPSIIISDADMCRRVLTNDETFKIGYPKSTLEVIRCKCFWSSSREEHKQYKRLISVLTMGHNTLEMYLPRMEDIVINSLEELSSMSHPVDFLKEMKNISFNIIIEIFMGSYNQHIITKIGNSFTEIYGALFSMPINFPGFAFHKGLLAREKLAKLIQPIVEERRLMKKNGDKKDLLDILLELNFEDGWKPEDEDIVDMMIGFVLAGHEATANGMMWSIIYLTQNPHILKKAKEEQEEIIKTRLPTQKQLSLKEIKQMVYLSHIINEMLRIVSINFANFREATRDVNINGYIIPKGWKVLTWARAVHMDPTYYSNPDEFNPSRWNDHNAKLGTFLPFGAGSMHCPGSDLAKIEISIFLHYFLLNYKLERVNPECPITCLPSSKPKDNCLAKVIKVSSVAA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01160 492 SUPERFAMILY Cytochrome P450 39 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 Pfam Cytochrome P450 46 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 Gene3D Cytochrome P450 35 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PANTHER CYTOCHROME P450 88D6 24 465 - -
Tsu01g01160 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01160 492 PANTHER CYTOCHROME P450 26 24 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01160 Tsu-Chr1 10719672 10745723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01160 9 484 Cytochrome P450 AT1G05160 47.083 4.24e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01160 K04123 K17875 ag:BAG68929 667.537