Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01159 ATGCGTTTTAGACGCCTAATCTCACCCCTTACCATGGGATATAATAATACATTAGAAATGCACCTAACACGCATTGAGGACATTATGATCAATTCGTTGGAGGAAATTTGTAGCATGAGTCATCCAATTGAGTTTTTGAAAGAGTTGAAGAATATTTCCTTTAGTGTCATCATTGATATTTTCATGGGATCTTACAATCAAAACATCATCACCAAAATTGGGAATTCTTTTACCGATTTACACAATGCATTATTCTCTATGCCTATTAACTTTCCCGGTTTTGCTTTTCGTAAAGGACTTATGGCACGTGAAAGGCTAGCCAAATTAATCCAGCCTATTGTAGAAGAAAGAAGGTCgatgataaaaaattgtgacAAAAAAGATTTACTTGATATTCTTTTGGAGTCAAGGGATGAAGATGGATGGAAACCTGAGAATGGGGATATTATTGACATTTTGATAGCGTTTGTACTTGCTGGTCATGAAAGTACAGCACATGCTATGATGTGGTCAATAATATATCTTACACAAAATCCACATATCTTGAAAAAAGCAAagATAATCAATGAAACGTTACGTCTTGCTAGTATTACCTTTGCACTTTTTCGAGAGGCAACTATGGATGTTAACATCAATGGTTATACAATACCAAAAGGATGGAAAGTGTTAATTTGGTTAAAAGCTATGCATTGGGATCCTACGTATCATCCAAATCCGAATGAGTTTAATCCATCAAGATGGGATGTAAGTTGTAGTATCATTATGTAA 768 0.3398 MRFRRLISPLTMGYNNTLEMHLTRIEDIMINSLEEICSMSHPIEFLKELKNISFSVIIDIFMGSYNQNIITKIGNSFTDLHNALFSMPINFPGFAFRKGLMARERLAKLIQPIVEERRSMIKNCDKKDLLDILLESRDEDGWKPENGDIIDILIAFVLAGHESTAHAMMWSIIYLTQNPHILKKAKIINETLRLASITFALFREATMDVNINGYTIPKGWKVLIWLKAMHWDPTYHPNPNEFNPSRWDVSCSIIM 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01159 255 PANTHER CYTOCHROME P450 88D6 2 249 - -
Tsu01g01159 255 Pfam Cytochrome P450 6 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01159 255 Pfam Cytochrome P450 186 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01159 255 PRINTS B-class P450 signature 186 197 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01159 255 PRINTS B-class P450 signature 203 230 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01159 255 PRINTS B-class P450 signature 231 246 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01159 255 Gene3D Cytochrome P450 1 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01159 255 PANTHER CYTOCHROME P450 26 2 249 - -
Tsu01g01159 255 SUPERFAMILY Cytochrome P450 2 248 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01159 Tsu-Chr1 10714893 10716877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01159 2 248 Cytochrome P450 AT1G05160 35.714 1.50e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01159 K04123 - ag:BAG68929 310.842