Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01146 ATGGAGGGTAAAGAAATTGAAGGAAGAAAGGTGGTTGAGGGAATTAATGtaggaaaagaaaatgaaaatgaagagattCTTAAGAAGATTATTGCTAATCATCCTTTGTTTGAAGTTATGATTGAGTCTCACATCAATTGTTTGAagGTCGGATCTGATGATGGAGGGATTGACATTATAAGTGATGCATGGAAGAAATTGGTCAGCACAAAGTCTAAAGCAGCAACTAATCCAAACACTTCGGACACTTCAGAGCTCGATCACTTCATGGAAGCATATTGCATGGCACTGAGTAAGCTCAAAGAAGTGATGgaagaacaaacaaaagaagCAAAAGCTTTCATCGATGCCACATACATTCAATTGCAGGAACTCAATGATGCAAATAATGAACCCGCAACTTAA 405 0.3407 MEGKEIEGRKVVEGINVGKENENEEILKKIIANHPLFEVMIESHINCLKVGSDDGGIDIISDAWKKLVSTKSKAATNPNTSDTSELDHFMEAYCMALSKLKEVMEEQTKEAKAFIDATYIQLQELNDANNEPAT 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01146 134 SMART KNOX1_2 25 69 IPR005540 GO:0003677|GO:0005634
Tsu01g01146 134 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 22 123 - -
Tsu01g01146 134 Pfam KNOX2 domain 81 125 IPR005541 GO:0003677|GO:0005634
Tsu01g01146 134 PANTHER FUSED COMPOUND LEAF 1 22 123 - -
Tsu01g01146 134 SMART KNOX2_2 76 127 IPR005541 GO:0003677|GO:0005634
Tsu01g01146 134 Pfam KNOX1 domain 27 51 IPR005540 GO:0003677|GO:0005634
Tsu01g01146 134 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01146 Tsu-Chr1 10605815 10606828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01146 25 125 Homeobox Transcription Factor Family AT4G08150 31.731 3.68e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01146 - - mtr:MTR_1g032750 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01146 01 10605815 10606828 Tsu01g01146 01 10605815 10606828 ECH