Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01132 ATGAATTTTGATGATCGGAGAGAGCTGAGAATTGACATTGCATTGGCACTTGGCAGCCTGGGAAGTCCCGTGTCCCCAACCAGGCTGAATCAGATTCCTATACTTGATGGATCGGCAAGGGAATGGGTGGCAGCCTTGGAAGAAGTCGGTTTAGAGATAGCAACTGATGTTGATGGAAAGAGCTATGAGAAAATAGCTCCACATGTTAATGAACAAGTGGATGTTTGGAGGAGTGATTCTTTTGTTTCCTTATTTCCCTCAGAAGTGCTTCGAGTAAGTTATGGTATAAACTTTCCGCAGGCACCTGCTATTGGCAGCCAGTGGTTTTCTACAACCCCCTTGGATGATTTGGTTTATTCCAAGCAAATAGCAATGTCAAGAACCTTCTGTATCTATGAGGAGGTTGAGCAAATGCGCAATGCTGGACTTATCAAAGGGGGTTCTCTAGAAAATGCCATTGTGTGCAGTGCCGATAAAGGTTGGTTGAATCCACCTCTTCATTTCAGTGATGAACCCTGTCGTCACAAGATTTTAGATCTAATTGGTGATCTCTCACTGTTTGCACAGTTTGGTAATCAAGGACTCCCAGTGGCACACATCTTAGCTTACAAGGGCGGTCATGCATTGCATGTTGATCTGGCTCGCCGACTGATGGGAATGACGTGA 666 0.4505 MNFDDRRELRIDIALALGSLGSPVSPTRLNQIPILDGSAREWVAALEEVGLEIATDVDGKSYEKIAPHVNEQVDVWRSDSFVSLFPSEVLRVSYGINFPQAPAIGSQWFSTTPLDDLVYSKQIAMSRTFCIYEEVEQMRNAGLIKGGSLENAIVCSADKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQFGNQGLPVAHILAYKGGHALHVDLARRLMGMT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01132 221 Gene3D lpxc deacetylase, domain 2 68 221 IPR011334 GO:0008759|GO:0009245
Tsu01g01132 221 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 30 218 IPR004463 GO:0008759|GO:0009245
Tsu01g01132 221 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 31 219 IPR004463 GO:0008759|GO:0009245
Tsu01g01132 221 SUPERFAMILY Ribosomal protein S5 domain 2-like 72 218 IPR020568 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01132 22 217 Carbohydrate Esterase AT1G25054 62.245 1.58e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01132 K02535 - gmx:100814465 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01132 01 10428521 10438292 Tsu01g01132 01 10428521 10438292 ECH