Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01091 ATGCTACAAGAGAGAAACTGTTGCTTAAGAATCAAGATGATGGACACTTATGTTATGGGATTGTTGATGTTTTTCATGGTTTATTATGTTGCTGGAACAACAACAGCCAAGGTAATTAATTGTCCAGAAGATATATCATGTGGAAATCAAGTTATCAAATTCCCTTTCCaaatcaaaaaccaaaatcCAATTTCACCTATGTGTGGTGGCTATCCAGGATTTGAGTTAATTTGTTCATCAAATAACCAAACTATGATTGAACTTCCTCACAAAGTGAAACTTAATGTCAAAAACATTGACTACAAACACCAAACTATTCAACTTTCAGATCCACATAATTGTCTTTACAAACATATCCACAACCTTAATCTTTCAGAATCTCATTTCAACTACTTGAAAAGTGATTATGATAACTTTCTTGTTATTGACTATCACTTTTTCAATTGTTCacttttgattagaaatgaattAGATTCATATTTGGTTCCTTGTCTAAGTACCTCAACCTCACAAACATATGTTATACCCTCTGATGAATATATCCAAAATCTTCCGCTTTCGTTTTGCACCAAAATGTTTAATGTTACATTCAAATGTTCTGATTCTATTGGTTTGAGTTGGTCTAAGCCTAATTGTAAAGACTGTGAATCAAAAGGAAACATATGTAGATGGAACTTGAAGAATACTACTAGTAGTACCAACAAGGAAATTTATTGTTTCCCCAAAAACAAGAAAGGTTCGTCAACGGCTCTAGTCAACACAGGGTCAGTTCTAGGATCGTTGTTTTTTATATTGCTGACTGGTGCAGTCTACCATATTTATGATTCCTACATTCTGAAGAAAGCAAAACAAGCGATTATAGAAAAGTTTTTAGAAGATTATAGAGCTCTTAAGCCTACTAGATACTCTTATCTAGAAATTAAGAGAATCACAAATAATTTTAGAGACAAGTTAGGACAAGGAGCCTATGGAACCGTATATAAAGGGAACATTTCAAAGGAATTCATCGTTGCCGTGAAGATACTAAATTTTTCTCAAGGAAATGGGCAAGATTTCCTCAACGAAGTTGGTACAATGGGCAGGATCCACCATGTTAATATTGTTCGATTGATCGGTTTTTGTGCAGATGGCTTTAAAAGAGCGcttatttatgagtttttgcCAAATGGTTCTCTACAAAAGTTCATAAATTCACCGGACAACAAGAAAAACTTCCTTGGATGGAAAAAGTTACACGAAATTGCTTTAGGAATAGCTAAAGGAATTGAATATCTTCATCAAGGTTGTGATCAACGCATCCTCCATTTCGATATCAAACCACAAAATGTGTTACTTGACCATaattttattccaaaaataTCTGACTTTGGTCTAGCTAAATTATGTTCAAGGGATCAAAGTATGGTGTCAATGACCACAGCTAGAGGAACTTTGGGATACATTGCTCCCGAAGTTTTTTCAAGGAACTTTGGAAACGTATCCTACAAATCAGATGTTTATAGCTATGGAATGATGTTGCTTGAAACAATAGGAGGGAGGAAAATCACAGAGGACTTGGAGGAAAACTCTAGTCATGTTTACTATCCAGAATGGATATATAATCTTATAGATGATCAAGAGCAAATGAGAATTCATGTTGATAATGAAGGGGATGaagaaattgcaagaaaaatgGCCATTGTGGGACTTTGGTGCATTCAGTGGCATGCTATGGATAGACCATCAATGCAAATGGTGGTTCAGATGTTGGAAGGAGATGTAGACAAAACTCCAATACCTCCCAATCCTTTTGCTTCTCAATCTAGACAACCTAGGAGAAATGGTGGACTTGCAACTACTAGACAACTAACTCATGAGTTAGATGTAATTGAAGAGTTAGAATGA 1884 0.3386 MLQERNCCLRIKMMDTYVMGLLMFFMVYYVAGTTTAKVINCPEDISCGNQVIKFPFQIKNQNPISPMCGGYPGFELICSSNNQTMIELPHKVKLNVKNIDYKHQTIQLSDPHNCLYKHIHNLNLSESHFNYLKSDYDNFLVIDYHFFNCSLLIRNELDSYLVPCLSTSTSQTYVIPSDEYIQNLPLSFCTKMFNVTFKCSDSIGLSWSKPNCKDCESKGNICRWNLKNTTSSTNKEIYCFPKNKKGSSTALVNTGSVLGSLFFILLTGAVYHIYDSYILKKAKQAIIEKFLEDYRALKPTRYSYLEIKRITNNFRDKLGQGAYGTVYKGNISKEFIVAVKILNFSQGNGQDFLNEVGTMGRIHHVNIVRLIGFCADGFKRALIYEFLPNGSLQKFINSPDNKKNFLGWKKLHEIALGIAKGIEYLHQGCDQRILHFDIKPQNVLLDHNFIPKISDFGLAKLCSRDQSMVSMTTARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMMLLETIGGRKITEDLEENSSHVYYPEWIYNLIDDQEQMRIHVDNEGDEEIARKMAIVGLWCIQWHAMDRPSMQMVVQMLEGDVDKTPIPPNPFASQSRQPRRNGGLATTRQLTHELDVIEELE 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01091 627 Gene3D Phosphorylase Kinase; domain 1 287 386 - -
Tsu01g01091 627 MobiDBLite consensus disorder prediction 594 612 - -
Tsu01g01091 627 SUPERFAMILY Protein kinase-like (PK-like) 296 584 IPR011009 -
Tsu01g01091 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Tsu01g01091 627 Pfam Protein kinase domain 316 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01091 627 SMART serkin_6 312 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01091 627 ProSiteProfiles Protein kinase domain profile. 312 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01091 627 PANTHER RECEPTOR-LIKE KINASE 46 626 - -
Tsu01g01091 627 Gene3D Transferase(Phosphotransferase) domain 1 387 591 - -
Tsu01g01091 627 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Tsu01g01091 627 MobiDBLite consensus disorder prediction 590 612 - -
Tsu01g01091 627 Pfam Wall-associated receptor kinase galacturonan-binding 41 110 IPR025287 GO:0030247
Tsu01g01091 627 PANTHER RUST RESISTANCE KINASE LR10-RELATED 46 626 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01091 Tsu-Chr1 10079332 10081992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01091 39 600 Receptor kinase-like Gene Family AT1G66910 36.876 1.37e-114 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g01091 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01091 - - mtr:MTR_1g031540 1001.89