Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01087 ATGAATACACAAACCAATATCTGGATGGATGTATTGTCGAAATCTATGTTATATGTAAGCTGTCCAAATAAGGTGCAATATTCCTCCGGTTATATGTACGGTCCTAACTGTATGAATACTAGTATTCTATATTCACACTACAATAATTCTTTCTATGTTGGTGACTACAACGTTGGCTACAAGTTACCTCTCTCGAAATTGGGACTGGGAGACGAGTGTCGTATAGAGTTTATGTATCTCACATCTCTGCCGCTTGAACATGGTGGTCGTCGTACCAACAATAACATTTCTTGTCCAAACATCCGTTATATGATGTTTTATGGATTTGAACTTTCTTGGCTCAATAGTATTTGTAAAGATGGTTTGACTGCGCTCGTTGACTATAATAACCACCTTCGCTGTACAGCTGCACTCGCGATTTCGTTCAGCACAGTTAAATTTGTTCTTGGAGTCCCATGTATCATTGTATTATTAATCTACAAATGGCGACAAAAACATTTATCAACGTATGACAACATCGAAGATTTTCTTAGCACTGACAATAGCATCATGCCTATAAGGTACTCTTACAAAGatataaaaaagataacaaAACAATTCACGACAAAATTGGGCAATGGAGGTTATGGATCTGTTTTCAAAGGACAACTTCGAAACGGTCGTCTTGTAGCAGTTAAATTATTGGACAATGTCAAGTTTAACGGTCAGGATTTTGTCAACGAAGTCGCTACCATCGGCAGGATTCATCATATTAATATTGTACAACTTATTGGTTTTTGTGTGGAGGATTCTAAACGTGCTCTTATATATGAATTCATGCCAAATGGATCACTTGAAAAGTACATATTTTCTCATATTGAAGAGAGTAAATTCTTGAGTTGTGAAAATTTGTATGCCATTTCTCTTGGAGTGGCTGGAGGCATTGAATATTTGCATAATGGATGCAATATGAAAATTCTACACTTTGACATAAAGCCTCATAACATCCTTcttgatgaaaattttaatcCAAAAGTATCTGATTTTGGACTAGTGAGACTTTGTCCTACAGATAAAAGTATTGTGTCATTAACTGCAGCAAGAGGAACCATTGGATACATGGCCCCTGAACTATTCTACAGAAATGTTGGCACAATATCTTACAGATAA 1149 0.3551 MNTQTNIWMDVLSKSMLYVSCPNKVQYSSGYMYGPNCMNTSILYSHYNNSFYVGDYNVGYKLPLSKLGLGDECRIEFMYLTSLPLEHGGRRTNNNISCPNIRYMMFYGFELSWLNSICKDGLTALVDYNNHLRCTAALAISFSTVKFVLGVPCIIVLLIYKWRQKHLSTYDNIEDFLSTDNSIMPIRYSYKDIKKITKQFTTKLGNGGYGSVFKGQLRNGRLVAVKLLDNVKFNGQDFVNEVATIGRIHHINIVQLIGFCVEDSKRALIYEFMPNGSLEKYIFSHIEESKFLSCENLYAISLGVAGGIEYLHNGCNMKILHFDIKPHNILLDENFNPKVSDFGLVRLCPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01087 382 Gene3D Transferase(Phosphotransferase) domain 1 273 381 - -
Tsu01g01087 382 ProSiteProfiles Protein kinase domain profile. 198 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01087 382 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 58 382 - -
Tsu01g01087 382 Pfam Protein kinase domain 201 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01087 382 PANTHER RUST RESISTANCE KINASE LR10-RELATED 58 382 IPR045874 GO:0004672
Tsu01g01087 382 Gene3D Phosphorylase Kinase; domain 1 175 272 - -
Tsu01g01087 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Tsu01g01087 382 SMART serkin_6 198 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01087 382 SUPERFAMILY Protein kinase-like (PK-like) 176 375 IPR011009 -
Tsu01g01087 382 ProSitePatterns Protein kinases ATP-binding region signature. 204 226 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01087 Tsu-Chr1 10038022 10040579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01087 139 382 Receptor kinase-like Gene Family AT1G66910 47.154 1.94e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g01087 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01087 - - aip:107605930 438.343