Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01052 ATGGCAGATGTATGTGAAAAAATGTGCAAGGGGCTAAAAAGTATTAAACCCTATCTTGCTATGGTGTCCCTTCAATTTGGTTATGCAGGAATGTACATCATCACTATGGTTTCATTTAAGCATGGCATGAGTCATTGGGTACTCTCCGTGTACCGTCATGTTGTCGCTACTATCTTCATGGCCCCCTTTGCCCTCGTCCTCGAAAGAAAAATTAGGCCAAAGATGACACTCCCCATTTTCTTGAGGTTGGCGGTTCTTGGTTTCCTTGAGCCAGTGCTTGATCAAAATTTGTACAACTTGGGAATGAAGAACACCTCAACAACGTTTGCATCTGCCACCGTTAACATTCTTCCAGCTATAACTTTTATAATGGCAATCATTTTCAGGTTAGAGACAGTAAACTTCAGAAAAATTCACAGCATAGCAAAGGTAGTTGGAACAGTTGTAACTGTATCAGGAGCAATGGTTATGACATTATACAAAGGCCCTGCATTTCAGCTCATTAAGGGACAATCATCAAACCAGCATGAAAGTGGAAGCACTGAACCCTCTGAACAAAACTTTGTGGCTGGCACTATAATGCTCATTTGCAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTACCCAGCAGAGCTCTCTATGACTGCTTGGATTTGCTTTTTGGGTATCTTTGAAGGTGGAATTGCAACTTTCATATTTGAACGTGACATGAGTGTTTGGGCCTTAGGCTTTGACTCAAGACTTCTTGCTTGTGTTTACTCTGGTGTGGTGTGTTCTGGAATGGCATACTATATACAAGGAGTTGTGACAAGAGAACGTGGGCCTGTTTTTGTTACTTCTTTCAGCCCTTTATGTATGATCATCACAGCTGCATTGGGTTCTATTGTCTTAGCTGAACAAACTCATTTGGGAAGTATTATTGGAGCTATAATCATTGTGTGTGGACTTTACACTGTCGTGTGGGGAAAAAGCAAAGACAGTGTGAACAATGCAACACAAAATGAGGGACAAGAATTGCCAATAAAGGATGCTACAAAAACAGGGTCAGACATTTTTGAAAGTGTTGAGGTCAATGTGCCTAATGAAATTAAGCTTGGAGGAAAGAATGTCAAAACATAA 1143 0.4068 MADVCEKMCKGLKSIKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVVATIFMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNLGMKNTSTTFASATVNILPAITFIMAIIFRLETVNFRKIHSIAKVVGTVVTVSGAMVMTLYKGPAFQLIKGQSSNQHESGSTEPSEQNFVAGTIMLICSCGGWASFFILQSFTLKMYPAELSMTAWICFLGIFEGGIATFIFERDMSVWALGFDSRLLACVYSGVVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGSIIGAIIIVCGLYTVVWGKSKDSVNNATQNEGQELPIKDATKTGSDIFESVEVNVPNEIKLGGKNVKT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01052 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 152 - -
Tsu01g01052 380 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020|GO:0016021
Tsu01g01052 380 Pfam EamA-like transporter family 29 151 IPR000620 GO:0016020|GO:0016021
Tsu01g01052 380 PANTHER WAT1-RELATED PROTEIN 12 345 - -
Tsu01g01052 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
Tsu01g01052 380 PANTHER WAT1-RELATED PROTEIN 12 345 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01052 Tsu-Chr1 9663914 9670216 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01052 12 359 Nodulin-like Gene Family AT1G44800 63.739 3.96e-167 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01052 - - gmx:100814921 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01052 01 9663914 9670216 Tsu01g01052 01 9663914 9670216 ECH