Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01028 ATGGGAGATTCCAAGGTAGAAACAATTTCCAGATTAGCTCAATGGAAAATCGACAACTTCGGACCTTGTTCTTACAAGAAATCCGACCCTTTCAAACTCGGTATTTGGAATTGGTATTTGTCAATAGAGAGAAATAGATATCTATATATACATCTATTTCCTGAACCTTCAAGACTTTCTAAGGAACAACCTCCTATTGCTCGTTTCATTCTTCGTGTTTCCAATActgcttcatcttcttcctcttcccgTAGATTTTACATTTCCCCTGTTCATGAAAGGGTGCTTAGAACATGTGATGACTTTGTCTGGCCCGTGGATACTACATTCCTTGGTCGATTGATTATTGATGTTGAATTTCTGGACCTGAAGATCCATCCTCTGAATGGTGGAGAAGCCAGTTCTATATGGCCATCTGACGGAAAACTGCAATCTGTTGCAACTCAAAACACTCTCCGATGCCTCTCTCGCATGCTTGATGAAGCTATACATGCTGACCTCACCATTATAACAGCTGACGGTACACTCAAGGCACATAAAGCAGTCATGTCCGCAACTTCTCCTGCGTTCAAGGCCTCATATCATGACAGCAATGAAGAGAAAGAGTCGTCTACAATCCACATAGAAGACATGTCACAAGAATCCTGCATGGCCCTTCTAAGTTACATGTACGGCACAATAAAACCCGGAGATTTCTGGAAACACAGGCTTGCATTGCTTGGAGCAGCCAATAAATACGACATCGGCGATCTCAAAGATGCGTGTGAGGAAAGCCTACTCGAAGATCTTAACTCAGGAAATGTTCTCGAGAGGCTGAATGAGGCTTGGTTGTACCAGCTGCAAAAGTTAAAGAAAGGATGTTTCACATTCTTATTTGATTTCGGTAAGATATATGATGttagagaagaaataaatacattttttcgTCATGCAGACAGGGATCTAATGCTGGAGATGTTTCAAGAAGTGCTTACAATTTGGAAGTAG 987 0.3941 MGDSKVETISRLAQWKIDNFGPCSYKKSDPFKLGIWNWYLSIERNRYLYIHLFPEPSRLSKEQPPIARFILRVSNTASSSSSSRRFYISPVHERVLRTCDDFVWPVDTTFLGRLIIDVEFLDLKIHPLNGGEASSIWPSDGKLQSVATQNTLRCLSRMLDEAIHADLTIITADGTLKAHKAVMSATSPAFKASYHDSNEEKESSTIHIEDMSQESCMALLSYMYGTIKPGDFWKHRLALLGAANKYDIGDLKDACEESLLEDLNSGNVLERLNEAWLYQLQKLKKGCFTFLFDFGKIYDVREEINTFFRHADRDLMLEMFQEVLTIWK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01028 328 Gene3D Potassium Channel Kv1.1; Chain A 139 292 IPR011333 -
Tsu01g01028 328 PANTHER OS08G0103600 PROTEIN 1 328 - -
Tsu01g01028 328 SMART BTB_4 165 263 IPR000210 GO:0005515
Tsu01g01028 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Tsu01g01028 328 CDD BTB_POZ_ZBTB_KLHL-like 164 246 - -
Tsu01g01028 328 Pfam BTB/POZ domain 158 261 IPR000210 GO:0005515
Tsu01g01028 328 ProSiteProfiles BTB domain profile. 165 224 IPR000210 GO:0005515
Tsu01g01028 328 SUPERFAMILY POZ domain 147 261 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01028 Tsu-Chr1 9441077 9444625 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tsu01g01028 BTB 7.5e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01028 K10523 - gmx:100775687 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01028 01 9441077 9444625 Tsu01g01028 01 9441077 9444625 ECH