Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01026 ATGTCTTCATCCTCGACCAACCTCACAAACCTCATTCCATTTCAGTCTTTGAATGAACCAAGAGCGCTTGCAGTACATACTTTGCCTTTTGGAGGAGCAGGAGAAAGTGGAGTTGGTGCATACCATGGAAAATTCTCGTTTGATGCATTTAGCCACAAAAAAGCAGTTTTGTATCGCAGCTTTTTTGGTGATGCTTCTATAAGGTATCCACCATATACCAAGACAAAGATGAGATTTTTGAAGGCTCTCATGACTAGTGGCTTACTAGCTATAATAAATGTCATATTTGGAAAGTCCTAG 300 0.4 MSSSSTNLTNLIPFQSLNEPRALAVHTLPFGGAGESGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTKTKMRFLKALMTSGLLAIINVIFGKS 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01026 99 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 85 IPR016162 GO:0016491
Tsu01g01026 99 PANTHER ALDEHYDE DEHYDROGENASE 23 99 - -
Tsu01g01026 99 PANTHER ALDEHYDE DEHYDROGENASE 23 99 IPR012394 GO:0006081
Tsu01g01026 99 SUPERFAMILY ALDH-like 21 82 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01026 Tsu-Chr1 9418295 9418804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01026 23 97 Aldehyde Dehydrogenase Gene Family AT1G44170 69.333 1.31e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01026 K00128 - gmx:100778722 126.716