Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01015 ATGCATGACTACATCAGCCCTTCAACAACGTTGATTGACATACTTGAGAGATACCATAAAACATCTGGGAAGAGGCTTTGGGATGCCAAACATGAGAACCTAAACAATGAGATTGAGAGACTCAAGAAAGAGAATGATGGAATGCAAGTTGACCTGAGGCATTTGAAGGGAGATGATATCAATTCACTAAACTACAAGGAGTTGATGAACTTAGAAGATGCCTTAGAAAATGGTCTCCTCACTATCCGCAAGAAACAGATGGAAGTGTACAAGATGTTCAAGAGAAACGACAAGATCTTAGAGGAGGAGAACAGAGAACTTAATTTTATTCTGCAGCAGCAACAACGTATGGAAGGTGGCAGAGAAATGGATAATGATGATCACTTTGATGAGAGTGGAAGAGATTTCAATTCTCAGATGCCATTTTCCTTTCGTGTTCAGCCAATGCAGCCAAATCTTCATGAAAGGTTCTAG 474 0.4008 MHDYISPSTTLIDILERYHKTSGKRLWDAKHENLNNEIERLKKENDGMQVDLRHLKGDDINSLNYKELMNLEDALENGLLTIRKKQMEVYKMFKRNDKILEEENRELNFILQQQQRMEGGREMDNDDHFDESGRDFNSQMPFSFRVQPMQPNLHERF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01015 157 Coils Coil 24 58 - -
Tsu01g01015 157 ProSiteProfiles K-box domain profile. 31 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
Tsu01g01015 157 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 156 - -
Tsu01g01015 157 PANTHER MADS-BOX TRANSCRIPTION FACTOR 1 156 - -
Tsu01g01015 157 Pfam K-box region 29 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01015 Tsu-Chr1 9260011 9264223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01015 1 90 MADS-box Gene Family AT5G20240 57.778 1.09e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01015 K09264 - gmx:100817554 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01015 01 9260011 9264223 Tsu01g01015 01 9260011 9264223 ECH