Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01000 ATGGAAGCATCACCAACTTCGACTCGTGCAGCGTACAAGTTTAATAGTTTAATGAGCcGTATTATCACGGTTGCATCAGCTGTAAATGATGGTCCAAGTATGGGAGGTGTTACAAATACTGCACCATGGATTGTGACAGTAGCTGCTAGTGGCATTGACAGAGCTTTCAAGAGCACTGTACAGTTAGGAAGTGGAAAAAATGTTTCTGGTGTAGGAATTAGCTGTTtcaatccaaaacaaaaacagtACCCTATTATTAATGCAATTAATGCCGCAAAAGACTTGAAGAGCAAGGATGATGCTAAAATTTTCTCTAATATCTGGAACTTCGATGGCATGTCCTCATGTTGCTGGCTAGCAGCATATGTGAAATCATTTCATCCCAATTGGACTCCTGCTGCAATCAGATCTGCAATTATCACCACTGCAAAACCTATAAGCAGAAGAATTAACAATGAAGCAGAATTTGCCTATGGTTCTGGTCAACTAAACCCAACAAAAGCACTAAATCCTGGTTTAATCTATGACATGGATGAATTTGGTTATATCCAATTCTTATGCCATGAAGGTTACAAAGGTTCAAGTTTATCAGAACTTGTTGGTTCACCTATAAACTGCTCCTCTTTACTTCCTGGACTTGGTCATGATGCTATCAACTATCCAACCATACAACTTAGCTTGGAAAGCAAGAAAGACATAAAAATTGGAGTTTTTAGAAGAACAGTTACCAATGTAGGTCCTGTTCGGTTATCTATAATGCTACTATTAGATCACAAAAAGGAGTTGAAATTATAG 795 0.3723 MEASPTSTRAAYKFNSLMSRIITVASAVNDGPSMGGVTNTAPWIVTVAASGIDRAFKSTVQLGSGKNVSGVGISCFNPKQKQYPIINAINAAKDLKSKDDAKIFSNIWNFDGMSSCCWLAAYVKSFHPNWTPAAIRSAIITTAKPISRRINNEAEFAYGSGQLNPTKALNPGLIYDMDEFGYIQFLCHEGYKGSSLSELVGSPINCSSLLPGLGHDAINYPTIQLSLESKKDIKIGVFRRTVTNVGPVRLSIMLLLDHKKELKL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01000 264 Gene3D - 186 259 - -
Tsu01g01000 264 Gene3D - 53 101 - -
Tsu01g01000 264 Gene3D Peptidase S8/S53 domain 119 179 IPR036852 GO:0004252|GO:0006508
Tsu01g01000 264 Gene3D Peptidase S8/S53 domain 13 52 IPR036852 GO:0004252|GO:0006508
Tsu01g01000 264 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 108 247 IPR045051 -
Tsu01g01000 264 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 101 IPR045051 -
Tsu01g01000 264 SUPERFAMILY Subtilisin-like 19 173 IPR036852 GO:0004252|GO:0006508
Tsu01g01000 264 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 108 247 - -
Tsu01g01000 264 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 13 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01000 Tsu-Chr1 9147911 9150809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01000 14 94 Subtilisin-like Serine Gene Family AT5G59190 43.210 6.48e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01000 - - mtr:MTR_7g075890 241.121