Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00997 ATGGTGCCTCCGGGGCCGCCGAATCCGATTGGTGGTGCCCCATCTTTGACGCCTTCGCTTATGAGAACAAATTCAGGGATGATGGGTGGTCAAGGAGGACAAGCTTCTTTTCCTTCGTTGGTTTCGCAGCGAAATCAGTTTAATAATATGAATATGTTGGGCAATATGTCTAATGTTGCTTCCATGATGAATCAGTCTTTTTCAAATGGGATTCCGAACTCGGGGCTTGGTGGATTGGGAAATGGTCAGCGGGGTGGTATGGAAGCTGGGGCTGAACAGGACCCTTTGTCTGGTGTTGGTAATGGAATGGGCTTTGGTAATCCTTCGTCGTCGTTTGGACAAGCTAATGTTGCTAACCCTGGTTCGTCTGGTCAAGGCCAAGGTCAAGGTCAAGGTCAGCAATTTTCAAACCCTTCGGGTAACCAGTTGTTGTCGGATCAACAACATTCGCAACAACTTGATGTTCAAAATTTCCAACATAGTCAGCAGCAGTCAGCGCAGCAGTTTTCGGCTCCAATGAAtactcaacaacatcatcagcAACAGCAGCATTTTCAATCAATGCGAGGAGGGATAGGTGGTATTGGACCAGTGAAGATGGAGCCACAGGCAAACAGCGATCAGTTTgggcagcagcagcagcagttGTCATCACTGAGGAATCTTGCTCAGGTAAAATTAGAACCGCAGCAACTTCAATCAATGAGAGGTATGGCTACTGTAAAAATGGAGCCTCAGCACAGTGATCAGCCGTTTCTGCAtcaacagcagcaacaacaacaacaacaacagcagcagcagcaacaacaactcCTCCATATGTCAAGGCAAACCTCCCAGGCTACTGCTGCACAGATGAACATTTTGCAACAACAGAGACTTTTACAATAtcaacagcagcagcaacatCAGCAGCAACAACTCTTAAAGTCCATGCCTCAGCAGCAACGGTCCCAGCTACCGCAACAGTTTCAACAGCAGAATATGCCTGTAAGGTCTCCTGTGAAACCAGCATATGAACCTGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATCGATTTCTGGAGGAAATTTGTTGCCGAGTATTTTGCTCCTAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATATATGGCACTGTGAAATATGTAATCGCAAACCGGGTCGTGGGTTTGAGGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTACGAAAGTGGTACTTTAGAAGAGCTACTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAAATTGTTCTAGATTATGCAAAAGCAATTCAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGaTATGCTCTTGGGAGTTTTGCGCTCGGCGTCATGAAGAGCTAATCCCCAGAAGATTGTTAATTCCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATATCAGTCATGCACTCAAAATGCAGCAACCAATCTATCTGTCCCAGAGTTACAAAATAACTGCAATTTGTTTGTTGCGTCAGCCCGTCAGCTGGCAAAAGCTTTAGAAGTTCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAAATATCAGAAGTAGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCTATGGACAGCTTAGCCAAATTCCCTCGGAGAACAAGTAATTCATCTGCACTTCACAGTCAGGTGCAACAGTCTGAAGATCAATTACAGCAGCAACAACAGCATATGGTGGCCCATAACTCAAATGGTGACCAGAACTCTGTTCAAAATGCTGCCATGCAAATTCCTTCTAACAACGGTGTGGCAAATGTAAATAACAGTGTCAGCTCAGCACCTGCATCGACCACTACAAGCACCATTGTTGGGCTTCTTCACCAGAACTCAATGAATGCTAGACAGCAAAGTTCAATGAACAATGCAAGCAGTCCATATGGAGGTGGTTCAGCGCATATTCCATCCCCAGGTTCTTGTAATACAGTGCCACAAGCACAACCAAACTCGTCCCCTTTTCATTCACCAACACCGTCCTCATCTAACAACCCTCAAACTTCTCACCCGGGCATAACATCTGCAAATCACATGAGTACAGCAAACTCGCCGGCTAATATTTCCTTGCAACAACAGCAGACATCAATTTCTGGTGATGCTGACCCTAGTAACGATGCTCAAAACTCTGTGCACAAAATCATACACGAGATGATGATGTCCTCCCAGATGAACGGAACAGGTGGAATGGTAGGTACTAATTCTCTCGGAAATGACATGAAGAATGTAAATGGCATCCTACCAGTGAGTACTAATACAGGCCTCAACGGTGGCAATGGCATGATGGTTAATGGAGGTGTGAACAGTAATTCTGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTTTACCAAATGGCATGAGACCTGGAATGGGAAATAATTCAGTCATGAATGGAAGGGGAGGAATGGCGTCTATGGCTCGGGAACAGGCAATGAATCATCAACAGGATTTGTCAAGCCAACTACTTAGTGGGTTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTAG 2745 0.4277 MVPPGPPNPIGGAPSLTPSLMRTNSGMMGGQGGQASFPSLVSQRNQFNNMNMLGNMSNVASMMNQSFSNGIPNSGLGGLGNGQRGGMEAGAEQDPLSGVGNGMGFGNPSSSFGQANVANPGSSGQGQGQGQGQQFSNPSGNQLLSDQQHSQQLDVQNFQHSQQQSAQQFSAPMNTQQHHQQQQHFQSMRGGIGGIGPVKMEPQANSDQFGQQQQQLSSLRNLAQVKLEPQQLQSMRGMATVKMEPQHSDQPFLHQQQQQQQQQQQQQQQQLLHMSRQTSQATAAQMNILQQQRLLQYQQQQQHQQQQLLKSMPQQQRSQLPQQFQQQNMPVRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQSCTQNAATNLSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSNSSALHSQVQQSEDQLQQQQQHMVAHNSNGDQNSVQNAAMQIPSNNGVANVNNSVSSAPASTTTSTIVGLLHQNSMNARQQSSMNNASSPYGGGSAHIPSPGSCNTVPQAQPNSSPFHSPTPSSSNNPQTSHPGITSANHMSTANSPANISLQQQQTSISGDADPSNDAQNSVHKIIHEMMMSSQMNGTGGMVGTNSLGNDMKNVNGILPVSTNTGLNGGNGMMVNGGVNSNSGVGVGGYGTMGLGPSGLPNGMRPGMGNNSVMNGRGGMASMAREQAMNHQQDLSSQLLSGLGAVNGFNNLQFD 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00997 914 MobiDBLite consensus disorder prediction 243 275 - -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 249 275 - -
Tsu01g00997 914 PANTHER LIM DOMAIN-BINDING PROTEIN 1 914 IPR029005 -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 688 753 - -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 306 334 - -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 1 33 - -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 73 216 - -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 306 332 - -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 103 188 - -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 604 642 - -
Tsu01g00997 914 Coils Coil 618 638 - -
Tsu01g00997 914 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 914 - -
Tsu01g00997 914 Pfam LIM-domain binding protein 347 601 IPR029005 -
Tsu01g00997 914 MobiDBLite consensus disorder prediction 17 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00997 Tsu-Chr1 9129405 9136053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00997 1 818 C2H2 Transcription Factor Family AT1G43850 59.306 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00997 - - gmx:100787573 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00564 07 4422664 4425870 Tsu01g00997 01 9129405 9136053 PCT