Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00984 atgaaaaacaaaatggcccttttgttcttttattcaACAACTTTCATGATTGGAGCAATGTTCTTATTTTCTGTTGAAGCTGAACCAGTAGAAGATAAACAAGCATTACTTGATTTCCTTCACAAAATGAACCATTCTACAAATCTCAATTGGAACAAGAATTCTTCTGTATGCAGAAAATGGATTAGAGTTATCTGCAACAAAGAACAATCAAGAGTTATATCTCTTCAGCTACAAAGTGTTGGATTGAATGGTTCAATTCCACCAAACACACTTAGTAGACTCTCAGCACTTCAAAATTTGAGTCTTGCATCAAATACTATAACTGGTTTTTTTCCTTCTGGCTTcaataagctaaaaaatttgACCTTTGTTTCTCTTCAATTTAACAAGTTTTCTGGTTCATTGCCATTAGATTTTTCTGTTTGGAAGAATCTAacttttgttgatttttctaACAATGGTTTTAATGGTAGCATACCTTTATCAGTATCAAATTTGACTCATCTTAGTTCTTTGATTCTAGCTAATAACACTCTTTCAGGTGAAATTCCTGATATTAATATTCCTAGTCTCAAAGATCTTAATTTGGAAAACAATAATCTTAGTGGTTTTGTTCCAAAATCACTTTCTAGATTTCCAAGTTTGTCATTTTCTGGTAACAATCTTACATATGTTAATGTAAATGTTTCTTATCCTACAAATGTtcataaaaaaaggaaaaaaaacaaaggacTTACAGAACCGGCGTTATTAGGTATCATAATTGGTGGTTCTGTGTTAGGATTTTTAGTCATAGGAGTTTTCTTGATTGTATGTTTCTACGAGAAACGCGGCGAAGATGGACAAATTATTAAGGGTCAGAAGAATAAAGAAGTTTTTTCGGAGAAAAAAGAAGCTTCTGAGAGTCTAGAACGAAACAAAATCGTGTTCTTTGAGGGTTGTAATCTTGTATTTGACttagaagatttgttgagagcttcTGCTGAGGTGCTTGGGAAAGGAACATTTGGTACTGTTTATAAGGCTGCTTTAGAGGATGCAACGACAGTCGCAGTTAAGAGGTTAAAGGAGGTTACGGTTGGGAAGCGCGAGTTCGAACAGCAGATGGAAATTGTGGGGAGGATTAGGCATGATAATGTGGTTGCATTAAGAGCTTATTACTATTCAAAGGAAGAGAAACTTATGGTTTATGATTATTATGAACAAGGCAGTGTTTCAGCAATGCTGCATGGTAAAAGAGGGGCAGAGAAGATTCCTTTAGATTGGGAAAGTAGGTTGAAAATAGCAATTGGTGTAGCAAGAGGAATTGCTCACATCCATGAAGAAAAACTAATCCATGGAAACATAAAAGCTTCAAACATCTTCTTCAATTCAAAAGGATATGGTTGTATATCTGACATTGGTCTAGCAACAATGATAATAAGTCCAATATCACCAAGAGCAAGAGGATACCTTGCGTCGGAAGTAACTGAAACACGAAAAGCAACGCCGGCATCCGATGTCTATAGTTTCGGTGTGTTGTTACTTGAACTTTTAACCGGAAAATCTCCCTTACATGGAGGTGAGGAAGTTGTTCATTTGGTTAGATGGGTAAATTCTGTGGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATTTAGAGTTATTGAGATATCCTAATATAGAGGAAGAAATGGTTGAGATGTTACAAATTGGTATGGCTTGTGTTGTAAGGTTACAAGATGATAGACCAAAAATGGATGAAGTTGTGAGAatggttgaagaaattcatAGGGCTAATAGTGGAAATAGACCTTCATCTGAATCTAGATCAGAATGTTCTACTCCAACTCCTCATGTGATTGAGACACCAACTTCTCTTGCagattga 1872 0.3317 MKNKMALLFFYSTTFMIGAMFLFSVEAEPVEDKQALLDFLHKMNHSTNLNWNKNSSVCRKWIRVICNKEQSRVISLQLQSVGLNGSIPPNTLSRLSALQNLSLASNTITGFFPSGFNKLKNLTFVSLQFNKFSGSLPLDFSVWKNLTFVDFSNNGFNGSIPLSVSNLTHLSSLILANNTLSGEIPDINIPSLKDLNLENNNLSGFVPKSLSRFPSLSFSGNNLTYVNVNVSYPTNVHKKRKKNKGLTEPALLGIIIGGSVLGFLVIGVFLIVCFYEKRGEDGQIIKGQKNKEVFSEKKEASESLERNKIVFFEGCNLVFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKEVTVGKREFEQQMEIVGRIRHDNVVALRAYYYSKEEKLMVYDYYEQGSVSAMLHGKRGAEKIPLDWESRLKIAIGVARGIAHIHEEKLIHGNIKASNIFFNSKGYGCISDIGLATMIISPISPRARGYLASEVTETRKATPASDVYSFGVLLLELLTGKSPLHGGEEVVHLVRWVNSVVREEWTSEVFDLELLRYPNIEEEMVEMLQIGMACVVRLQDDRPKMDEVVRMVEEIHRANSGNRPSSESRSECSTPTPHVIETPTSLAD 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00984 623 PANTHER LRR RECEPTOR-LIKE KINASE 17 617 - -
Tsu01g00984 623 Gene3D Ribonuclease Inhibitor 30 238 IPR032675 -
Tsu01g00984 623 PANTHER OS05G0588300 PROTEIN 17 617 - -
Tsu01g00984 623 MobiDBLite consensus disorder prediction 591 623 - -
Tsu01g00984 623 Gene3D Phosphorylase Kinase; domain 1 290 400 - -
Tsu01g00984 623 Gene3D Transferase(Phosphotransferase) domain 1 401 609 - -
Tsu01g00984 623 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Tsu01g00984 623 Pfam Protein tyrosine and serine/threonine kinase 330 585 IPR001245 GO:0004672|GO:0006468
Tsu01g00984 623 SUPERFAMILY Protein kinase-like (PK-like) 330 594 IPR011009 -
Tsu01g00984 623 ProSiteProfiles Protein kinase domain profile. 326 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00984 623 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Tsu01g00984 623 MobiDBLite consensus disorder prediction 594 623 - -
Tsu01g00984 623 SUPERFAMILY L domain-like 51 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00984 Tsu-Chr1 9005149 9007574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00984 6 611 Receptor kinase-like Gene Family AT4G23740 54.961 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu01g00984 PK_Tyr_Ser-Thr 1.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00984 - - aprc:113851984 856.284