Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00940 ATGTGTTCCAAAAATCAAAGTATTGTATCCATGACTACAGTTAAGGGAACATTAGGCTACATGGCACCTGAAGTATTTTCTAGAAACTTTGGGAATGTGTCATATAAGTCTGATATATACAGTTACGGTATGCTGTTATTGGAGATGGTTGGAGGAAGAAAGAATACAAAAACAACCGGTGGCGAAGAAAATGTTAAAGTTGTGTATCCAGATTGGATCCATAATTTGCTTGAAGGGGGAGATATACAAATCCCTATCGATGAAGAGGGAGATTTCAGAATTGCAAAAAAATTGGCAACCATCGGACTTTGGTGTATACAATGGCACCCTTTGCATCGCCCGCCAATGAAAACTGTGTTACAAATGCTTCAAGGAGAGGGGGACAAGTTAAAAGTACCGAGCAATCCTTTCGGACCTACAACTACAACTACTACAATTGCTAATATTGTTGTAGAGCGTATTAATTTGGAGTTGGATGTGATTGAAGAATTAGATTAG 498 0.3835 MCSKNQSIVSMTTVKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTGGEENVKVVYPDWIHNLLEGGDIQIPIDEEGDFRIAKKLATIGLWCIQWHPLHRPPMKTVLQMLQGEGDKLKVPSNPFGPTTTTTTIANIVVERINLELDVIEELD 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00940 165 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 165 IPR045874 GO:0004672
Tsu01g00940 165 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 165 - -
Tsu01g00940 165 Pfam Protein kinase domain 8 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00940 165 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
Tsu01g00940 165 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00940 165 SUPERFAMILY Protein kinase-like (PK-like) 9 123 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00940 Tsu-Chr1 8594705 8595202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00940 1 142 Receptor kinase-like Gene Family AT5G38280 45.695 1.08e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu01g00940 Pkinase 2.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00940 - - lja:Lj0g3v0145559.1 256.529